RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 KHDRBS3O75525 346 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC25A12O75746 678 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 SYPP08247 313 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 IGFBP3P17936 291 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 C4BPBP20851 252 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 CRABP1P29762 137 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 OR1D4P47884 311 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 VEGFCP49767 419 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 RPS15P62841 145 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 TDGQ13569 410 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 MFSD13AQ14CX5 517 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 TOMM34Q15785 309 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 ACKR1Q16570 336 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 C1orf140Q5VVS0 124 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 SFRP4Q6FHJ7 346 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC36A1Q7Z2H8 476 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 MARCH3Q86UD3 253 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 PM20D2Q8IYS1 436 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 DNAAF1Q8NEP3 725 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 OR8H1Q8NGG4 311 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 TBL1XR1Q9BZK7 514 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 SEMA4CQ9C0C4 833 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 MRPL22Q9NWU5 206 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 PIPOXQ9P0Z9 390 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 PPIEQ9UNP9 301 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-209ENST00000454591 REV3LO60673 3130 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 CEP192Q8TEP8 1941 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ADAMTS9Q9P2N4 1935 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 IGLV3-12A0A075B6K2 115 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 A0A1B0GX78 115 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 A6NIZ1 184 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 OR6C65A6NJZ3 312 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 A8MUA0 341 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 H7C1C5 153 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 AGRPO00253 132 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 CTAG2O75638 210 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 RBBP9O75884 186 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 PIAS2O75928 621 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 IFNA7P01567 189 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ISG15P05161 165 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ITPKBP27987 946 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ABCD3P28288 659 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 SOX2P48431 317 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 SELENOPP49908 381 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 NR0B1P51843 470 aaKnown RBP11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 CAPZA1P52907 286 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 CLDN12P56749 244 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC26A5P58743 744 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 RAP1BP61224 184 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 LCN6P62502 163 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 RAP1AP62834 184 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 CFHR1Q03591 330 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 RBMS2Q15434 407 aaKnown RBP11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 LINC00303Q3SY05 128 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 DEGS2Q6QHC5 323 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 Q6ZTK2 550 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 CDH26Q8IXH8 852 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 OR10AC1Q8NH08 325 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 RLN3Q8WXF3 142 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ST8SIA1Q92185 356 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 PTX4Q96A99 478 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 AMELYQ99218 206 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 LMAN1LQ9HAT1 526 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 ELOVL3Q9HB03 270 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 MYOZ1Q9NP98 299 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 KCNG2Q9UJ96 466 aa11.28□□□□□ -0.6
ECHDC1-209ENST00000454591 LOC100289279A0A1B0GTE1 492 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 RPS10-NUDT3A0A1W2PQS6 291 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 MEGF11A6BM72 1044 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 SHOXO15266 292 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 DUX1O43812 170 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 DOK2O60496 412 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 RGS11O94810 467 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 MAOBP27338 520 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 AP2S1P53680 142 aaPredicted RBP11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 KCNAB1Q14722 419 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 MPPED2Q15777 294 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 MEP1BQ16820 701 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 DEFB133Q30KQ1 61 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 WDR74Q6RFH5 385 aaPredicted RBP11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 FAM198BQ6UWH4 519 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 HDDC2Q7Z4H3 204 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 SERPINA12Q8IW75 414 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 BEST4Q8NFU0 473 aa11.27□□□□□ -0.61
ECHDC1-209ENST00000454591 OR6N1Q8NGY5 312 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms