RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 LOC100289279A0A1B0GTE1 492 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 CENPBD1B2RD01 187 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 J3KTA2 159 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 FARS2O95363 451 aaKnown RBP17.82■□□□□ 0.44
SDC1-205ENST00000447124 MMP7P09237 267 aaPredicted RBP17.82■□□□□ 0.44
SDC1-205ENST00000447124 MAKP20794 623 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 IGFBP5P24593 272 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 ALDH3B1P43353 468 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 GALK2Q01415 458 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 ST3GAL3Q11203 375 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 FHL1Q13642 323 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 RIN1Q13671 783 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 MAD2L1BPQ15013 274 aaPredicted RBP17.82■□□□□ 0.44
SDC1-205ENST00000447124 C10orf128Q5T292 105 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 C8orf82Q6P1X6 216 aaPredicted RBP17.82■□□□□ 0.44
SDC1-205ENST00000447124 PODNL1Q6PEZ8 512 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 SLC16A14Q7RTX9 510 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 LRRC75AQ8NAA5 344 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 ZNF540Q8NDQ6 660 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 SLC30A7Q8NEW0 376 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 NOXO1Q8NFA2 376 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 PRRC1Q96M27 445 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 RNF121Q9H920 327 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 CDC42EP3Q9UKI2 254 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 HIF3AQ9Y2N7 669 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 UGT2A1Q9Y4X1 527 aa17.82■□□□□ 0.44
SDC1-205ENST00000447124 MCIDASD6RGH6 385 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 NME4O00746 187 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 SLC2A10O95528 541 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 TACSTD2P09758 323 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 FAM157CP0CG43 387 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 IFI30P13284 250 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 COL8A2P25067 703 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 IL2RGP31785 369 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 CDAP32320 146 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 NRN1LQ496H8 165 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 ELFN2Q5R3F8 820 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 SLC25A47Q6Q0C1 308 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 LRRC18Q8N456 261 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 BEX2Q9BXY8 128 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 TXNIPQ9H3M7 391 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 SLC7A8Q9UHI5 535 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 DUSP13Q9UII6 198 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 ZNF346Q9UL40 294 aaKnown RBP17.81■□□□□ 0.44
SDC1-205ENST00000447124 AP3M1Q9Y2T2 418 aa17.81■□□□□ 0.44
SDC1-205ENST00000447124 CXCR6O00574 342 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 CLPTM1O96005 669 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 IFNA2P01563 188 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 HPXP02790 462 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 ERCC1P07992 297 aaPredicted RBP17.8■□□□□ 0.44
SDC1-205ENST00000447124 FAM157BP0CG42 384 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 DAP3P51398 398 aaKnown RBP17.8■□□□□ 0.44
SDC1-205ENST00000447124 ZNF84P51523 738 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 SLC7A2P52569 658 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 FMODQ06828 376 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 TRIP10Q15642 601 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 SLC36A2Q495M3 483 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 TMEM53Q6P2H8 277 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 CBLL1Q75N03 491 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 TSEN54Q7Z6J9 526 aaKnown RBP17.8■□□□□ 0.44
SDC1-205ENST00000447124 DPPA2Q7Z7J5 298 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 CPEB3Q8NE35 698 aaKnown RBP17.8■□□□□ 0.44
SDC1-205ENST00000447124 NABP1Q96AH0 204 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 BPIFA2Q96DR5 249 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 HOPXQ9BPY8 73 aaPredicted RBP17.8■□□□□ 0.44
SDC1-205ENST00000447124 MS4A5Q9H3V2 200 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 SIAEQ9HAT2 523 aa17.8■□□□□ 0.44
SDC1-205ENST00000447124 NPIPB13A6NJU9 1138 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 NPIPB4C9JG80 1138 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 M0R233 179 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 CCDC22O60826 627 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 ENTPD5O75356 428 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 TGFAP01135 160 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 GSK3BP49841 420 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 ERVS71-1P61550 626 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 RPS23P62266 143 aaKnown RBP17.79■□□□□ 0.44
SDC1-205ENST00000447124 MRPS34P82930 218 aaKnown RBP17.79■□□□□ 0.44
SDC1-205ENST00000447124 ALG10Q5BKT4 473 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 FAM166AQ6J272 317 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 TBPL2Q6SJ96 375 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 IL17RELQ6ZVW7 336 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 ARPINQ7Z6K5 226 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 IGFN1Q86VF2 1251 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 NRMQ8IXM6 262 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 OFCC1Q8IZS5 231 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 CLDN22Q8N7P3 220 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 SPATA3Q8NHX4 192 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 LZICQ8WZA0 190 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 NSMAFQ92636 917 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 TSPAN32Q96QS1 320 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 FNDC11Q9BVV2 318 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 OR51B6Q9H340 312 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 CHODLQ9H9P2 273 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 KCNS2Q9ULS6 477 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 STAB1Q9NY15 2570 aa17.79■□□□□ 0.44
SDC1-205ENST00000447124 HTR3EA5X5Y0 456 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 MGRN1O60291 552 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 PRSS23O95084 383 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 NAT2P11245 290 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 LSP1P33241 339 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms