RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MBOAT2Q6ZWT7 520 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 TSEN54Q7Z6J9 526 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAB43Q86YS6 212 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 GRAMD2AQ8IUY3 354 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 NRMQ8IXM6 262 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CYP4Z2PQ8N1L4 340 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SUMF1Q8NBK3 374 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC38A9Q8NBW4 561 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF114Q8NC26 417 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 C17orf47Q8NEP4 570 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 DEFB124Q8NES8 71 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRSS33Q8NF86 280 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 BPIFB6Q8NFQ5 453 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR5L2Q8NGL0 311 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 WDR36Q8NI36 951 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 NUBPLQ8TB37 319 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CNIH3Q8TBE1 160 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 FANK1Q8TC84 345 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC7A13Q8TCU3 470 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM255BQ8WV15 326 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SECTM1Q8WVN6 248 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 DNAJA4Q8WW22 397 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM239Q8WW34 195 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CNOT9Q92600 299 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC35B4Q969S0 331 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ADIPOR1Q96A54 375 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 C8orf44Q96CB5 159 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMCO6Q96DC7 493 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SCMH1Q96GD3 660 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SH3YL1Q96HL8 342 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PLEKHA8Q96JA3 519 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 MPP4Q96JB8 637 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC38A2Q96QD8 506 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 WFDC6Q9BQY6 131 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 DGCR6LQ9BY27 220 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 YTHDF1Q9BYJ9 559 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 DEFB126Q9BYW3 111 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 NDEL1Q9GZM8 345 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC26A1Q9H2B4 701 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RASSF1Q9NS23 344 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CLN6Q9NWW5 311 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 KLRF1Q9NZS2 232 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 NTNG1Q9Y2I2 539 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PCDHGB5Q9Y5G0 923 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 GOLGA4Q13439 2230 aaKnown RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A087WUU8 490 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 LOC102723996A0A087X1L8 192 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGHV1-45A0A0A0MS14 117 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 NSG1A0A0A6YYJ2 146 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A0B4J2E0 115 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 SMIM31A0A1B0GVY4 71 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A1B0GWA3 101 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A1B0GX12 115 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A1W2PQD3 144 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR6C70A6NIJ9 312 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 SNTNA6NMZ2 147 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 ENO4A6NNW6 628 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 EFCAB9A8MZ26 197 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 NPIPB9F8W1W9 429 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 WWP2O00308 870 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 TO15178 435 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 HCRTR2O43614 444 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRKNO60260 465 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 TSPAN2O60636 221 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 LMX1BO60663 402 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAD1O60671 282 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 HCN1O60741 890 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC25A12O75746 678 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 RGS11O94810 467 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR6B1O95007 311 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAB40ALP0C0E4 278 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 LINGO3P0C6S8 592 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CCDC159P0C7I6 412 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 PNMTP11086 282 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 COX6A1P12074 109 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 GP1BBP13224 206 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRG2P13727 222 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 TCN2P20062 427 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 PGCP20142 388 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 TBXA2RP21731 343 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 TCEA1P23193 301 aaKnown RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CHMP24386 653 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CRHBPP24387 322 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 HTR2AP28223 471 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 GTF2E2P29084 291 aaKnown RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 EVI2BP34910 448 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 POLR2IP36954 125 aaKnown RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPL5P46777 297 aaKnown RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 OMPP47874 163 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CENPAP49450 140 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 HLCSP50747 726 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF136P52737 540 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 EFNA3P52797 238 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CDH15P55291 814 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CLDN6P56747 220 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 COX10Q12887 443 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTGES3Q15185 160 aaKnown RBP3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CD226Q15762 336 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 NEDD8Q15843 81 aa3.39□□□□□ -1.87
HMGB3P20-201ENST00000417997 CTU2Q2VPK5 515 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms