RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CGGBP1Q9UFW8 167 aaPredicted RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 SLC7A8Q9UHI5 535 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ZNF346Q9UL40 294 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 MOKQ9UQ07 419 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 CMAHPQ9Y471 501 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 TIMM10BQ9Y5J6 103 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 FKBP7Q9Y680 259 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 MYO9AB2RTY4 2548 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 LOC390937A0A1W2PQ73 354 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 AQP12BA6NM10 295 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 TLX2O43763 284 aaPredicted RBP5.55□□□□□ -1.52
USP54-202ENST00000413442 TXNDC12O95881 172 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 MT-ND5P03915 603 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 F13BP05160 661 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SOD3P08294 240 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CST2P09228 141 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CECR9P0C854 216 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CD79AP11912 226 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SDHAP31040 664 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 RPL4P36578 427 aaKnown RBP5.55□□□□□ -1.52
USP54-202ENST00000413442 ACVR1BP36896 505 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 AQP2P41181 271 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CAPZA2P47755 286 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 BLVRAP53004 296 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 MRPS11P82912 194 aaKnown RBP5.55□□□□□ -1.52
USP54-202ENST00000413442 SF3A3Q12874 501 aaKnown RBP eCLIP5.55□□□□□ -1.52
USP54-202ENST00000413442 FOXD4Q12950 439 aaPredicted RBP5.55□□□□□ -1.52
USP54-202ENST00000413442 DAG1Q14118 895 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 KCNMB1Q16558 191 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CLEC12BQ2HXU8 276 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 TBC1D28Q2M2D7 210 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 RFX4Q33E94 735 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 C9orf135Q5VTT2 229 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 C11orf71Q6IPW1 123 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ALKBH2Q6NS38 261 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 PODNL1Q6PEZ8 512 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SLC25A47Q6Q0C1 308 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SMARCD3Q6STE5 483 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 FOXL2NBQ6ZUU3 175 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 TRPM8Q7Z2W7 1104 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 VTCN1Q7Z7D3 282 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 TSPYL5Q86VY4 417 aaPredicted RBP5.55□□□□□ -1.52
USP54-202ENST00000413442 DHFR2Q86XF0 187 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SKA3Q8IX90 412 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 AQP12AQ8IXF9 295 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 C10orf67Q8IYJ2 551 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CLDN22Q8N7P3 220 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 LRRC75AQ8NAA5 344 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 NOXO1Q8NFA2 376 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 KBTBD8Q8NFY9 601 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 OR10H5Q8NGA6 315 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ZNF519Q8TB69 540 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 BCAS4Q8TDM0 211 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 GNPDA2Q8TDQ7 276 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 C11orf40Q8WZ69 217 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ITFG2Q969R8 447 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 COX4I2Q96KJ9 171 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 LRGUKQ96M69 825 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 TNFRSF13CQ96RJ3 184 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 DIRC2Q96SL1 478 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 C1QTNF6Q9BXI9 259 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 NELFAQ9H3P2 528 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 PLK3Q9H4B4 646 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 RNF121Q9H920 327 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ELOVL3Q9HB03 270 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 CCNB1IP1Q9NPC3 277 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 C20orf141Q9NUB4 165 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ARL8BQ9NVJ2 186 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SLCO1C1Q9NYB5 712 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 NKIRAS2Q9NYR9 191 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 TAS2R1Q9NYW7 299 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SEC14L4Q9UDX3 406 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 EGFL7Q9UHF1 273 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ATPIF1Q9UII2 106 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 NDRG4Q9ULP0 352 aaKnown RBP5.55□□□□□ -1.52
USP54-202ENST00000413442 BAIAP2Q9UQB8 552 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 SIGLEC7Q9Y286 467 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 ARID1AO14497 2285 aa5.55□□□□□ -1.52
USP54-202ENST00000413442 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 A0A096LPE4 126 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 IGHV2OR16-5A0A0B4J2B6 119 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 A0A1W2PPZ6 126 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 LRRN3E7EW58 273 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 KPNA4O00629 521 aaPredicted RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 ARPC2O15144 300 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 SYNGR3O43761 229 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 SEMG1P04279 462 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 HEXAP06865 529 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 ZNF250P15622 560 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 TNFRSF1BP20333 461 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 CPT2P23786 658 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 FPR3P25089 353 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 SLC6A6P31641 620 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 APLNRP35414 380 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 MAGEA2P43356 314 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 OMPP47874 163 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 RGS6P49758 472 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 IDH3GP51553 393 aaPredicted RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 ARHGDIAP52565 204 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 NUDT6P53370 316 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms