RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SKA3Q8IX90 412 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 NEUROG1Q92886 237 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 ZNF570Q96NI8 536 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 FEVQ99581 238 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 SMURF2Q9HAU4 748 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 REV1Q9UBZ9 1251 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 IER3IP1Q9Y5U9 82 aa13.84□□□□□ -0.19
GDPD3-202ENST00000406256 IGHV1-18A0A0C4DH31 117 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 PRSS37A4D1T9 235 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 A6NIZ1 184 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 SHISA9B4DS77 424 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 H3BNX3 289 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 BHLHE40O14503 412 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 ARPC3O15145 178 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 CD40P25942 277 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 CDKN2AP42771 156 aaKnown RBP13.83□□□□□ -0.19
GDPD3-202ENST00000406256 RAP1BP61224 184 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 RAP1AP62834 184 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 DBPQ10586 325 aaPredicted RBP13.83□□□□□ -0.19
GDPD3-202ENST00000406256 KPNB1Q14974 876 aaKnown RBP13.83□□□□□ -0.19
GDPD3-202ENST00000406256 ATP6AP1Q15904 470 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 ZNF362Q5T0B9 420 aaPredicted RBP13.83□□□□□ -0.19
GDPD3-202ENST00000406256 GPR139Q6DWJ6 353 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 SLC22A24Q8N4F4 322 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 KBTBD8Q8NFY9 601 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 GIPC3Q8TF64 312 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 IGFBPL1Q8WX77 278 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 GTPBP3Q969Y2 492 aaKnown RBP13.83□□□□□ -0.19
GDPD3-202ENST00000406256 VSX1Q9NZR4 365 aaPredicted RBP13.83□□□□□ -0.19
GDPD3-202ENST00000406256 MGAT4BQ9UQ53 548 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 POFUT2Q9Y2G5 429 aa13.83□□□□□ -0.19
GDPD3-202ENST00000406256 SOCS2O14508 198 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 ARHGEF9O43307 516 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 CIB2O75838 187 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 HLA-HP01893 362 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 SCG5P05408 212 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 CELA3BP08861 270 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 CTLA4P16410 223 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 PRKACGP22612 351 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 SLC6A6P31641 620 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 CDAP32320 146 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 CD47Q08722 323 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 ETFDHQ16134 617 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 THEM4Q5T1C6 240 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 ADAM5Q6NVV9 412 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 KLHL17Q6TDP4 642 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 B3GLCTQ6Y288 498 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 MDP1Q86V88 176 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 FAM169BQ8N8A8 192 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 OR4Q3Q8NH05 313 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 DDOQ99489 341 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 DENND2DQ9H6A0 471 aaPredicted RBP13.83□□□□□ -0.2
GDPD3-202ENST00000406256 ESRP2Q9H6T0 727 aaKnown RBP13.83□□□□□ -0.2
GDPD3-202ENST00000406256 YY1AP1Q9H869 796 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 NGBQ9NPG2 151 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 PDP1Q9P0J1 537 aaPredicted RBP13.83□□□□□ -0.2
GDPD3-202ENST00000406256 GRHPRQ9UBQ7 328 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 RNF115Q9Y4L5 304 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 AP4S1Q9Y587 144 aa13.83□□□□□ -0.2
GDPD3-202ENST00000406256 M0R1B8 84 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 DCTN6O00399 190 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 ABCD4O14678 606 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 DEAF1O75398 565 aaPredicted RBP13.82□□□□□ -0.2
GDPD3-202ENST00000406256 SOX14O95416 240 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 WNT11O96014 354 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 PATE4P0C8F1 98 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 CBR1P16152 277 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 PTAFRP25105 342 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 HOXC12P31275 282 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 RPS6KA3P51812 740 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 MRPS34P82930 218 aaKnown RBP13.82□□□□□ -0.2
GDPD3-202ENST00000406256 C3orf36Q3SXR2 165 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 NRN1LQ496H8 165 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 SHQ1Q6PI26 577 aaKnown RBP13.82□□□□□ -0.2
GDPD3-202ENST00000406256 PAMR1Q6UXH9 720 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 PYDC1Q8WXC3 89 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 LRTOMTQ8WZ04 291 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 NSMAFQ92636 917 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 ERMAPQ96PL5 475 aaPredicted RBP13.82□□□□□ -0.2
GDPD3-202ENST00000406256 SH3GL3Q99963 347 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 SYT4Q9H2B2 425 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 ITPR3Q14573 2671 aa13.82□□□□□ -0.2
GDPD3-202ENST00000406256 GNGT2O14610 69 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 AHCYL1O43865 530 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 CD3EP07766 207 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 MMP7P09237 267 aaPredicted RBP13.81□□□□□ -0.2
GDPD3-202ENST00000406256 CECR9P0C854 216 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 HIST1H1CP16403 213 aaKnown RBP13.81□□□□□ -0.2
GDPD3-202ENST00000406256 CALCRP30988 508 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 UBE2NP61088 152 aaKnown RBP13.81□□□□□ -0.2
GDPD3-202ENST00000406256 CLEC12AQ5QGZ9 265 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 FAHD1Q6P587 224 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 TMEM108Q6UXF1 575 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 AMIGO2Q86SJ2 522 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 ADCK1Q86TW2 530 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 CDH24Q86UP0 819 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 ZNF584Q8IVC4 421 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 CCDC36Q8IYA8 594 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 FNDC8Q8TC99 324 aa13.81□□□□□ -0.2
GDPD3-202ENST00000406256 NRBF2Q96F24 287 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms