RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 FOXRED2Q8IWF2 684 aa15.54■□□□□ 0.08
PTPRA-205ENST00000399903 OR51A4Q8NGJ6 313 aa15.54■□□□□ 0.08
PTPRA-205ENST00000399903 RGP1Q92546 391 aaPredicted RBP15.54■□□□□ 0.08
PTPRA-205ENST00000399903 TMEM106AQ96A25 262 aa15.54■□□□□ 0.08
PTPRA-205ENST00000399903 ZBTB8AQ96BR9 441 aa15.54■□□□□ 0.08
PTPRA-205ENST00000399903 AICDAQ9GZX7 198 aa15.54■□□□□ 0.08
PTPRA-205ENST00000399903 PARP12Q9H0J9 701 aaKnown RBP15.54■□□□□ 0.08
PTPRA-205ENST00000399903 STEAP1Q9UHE8 339 aa15.54■□□□□ 0.08
PTPRA-205ENST00000399903 ZNF860A6NHJ4 632 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 ALOX12BO75342 701 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 DAOP14920 347 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 CENPAP49450 140 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 DHRS2Q13268 280 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 GFOD2Q3B7J2 385 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 FAM220AQ7Z4H9 259 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 ARMC10Q8N2F6 343 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 LINC01555Q8NAE3 123 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 OR5AK2Q8NH90 309 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 FOXN4Q96NZ1 517 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 CLCC1Q96S66 551 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TMEM27Q9HBJ8 222 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 SRA1Q9HD15 236 aaKnown RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 THAP10Q9P2Z0 257 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3EA0A087X179 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 GXYLT2A0PJZ3 443 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 SLC35G4P0C7Q5 338 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 AKR1C4P17516 323 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 POU3F4P49335 361 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 EIF2B1Q14232 305 aaKnown RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 HABP2Q14520 560 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 ACOT7LQ6ZUV0 252 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 GALNT16Q8N428 558 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 INSM2Q96T92 566 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3DA0A087WVF3 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3IA0A087WXS9 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3KA0A087X1G2 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3FA6NER0 549 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 GGT3PA6NGU5 568 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3LB9A6J9 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3HP0C7X1 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 MAPK3P27361 379 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 BCL6P41182 706 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 SNRPNP63162 240 aaKnown RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 ACER2Q5QJU3 275 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3GQ6DHY5 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3CQ6IPX1 549 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TBC1D3Q8IZP1 549 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-205ENST00000399903 COX18Q8N8Q8 333 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 OR4S1Q8NGB4 309 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 ELP5Q8TE02 316 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 UQCC1Q9NVA1 299 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 TNFSF18Q9UNG2 199 aa15.53■□□□□ 0.08
PTPRA-205ENST00000399903 RNF222A6NCQ9 220 aa15.52■□□□□ 0.08
PTPRA-205ENST00000399903 MCIDASD6RGH6 385 aa15.52■□□□□ 0.08
PTPRA-205ENST00000399903 HTR3BO95264 441 aa15.52■□□□□ 0.08
PTPRA-205ENST00000399903 SNRNP70P08621 437 aaKnown RBP15.52■□□□□ 0.08
PTPRA-205ENST00000399903 EXOSC6Q5RKV6 272 aaKnown RBP15.52■□□□□ 0.08
PTPRA-205ENST00000399903 TMEFF1Q8IYR6 380 aa15.52■□□□□ 0.08
PTPRA-205ENST00000399903 GABRG1Q8N1C3 465 aa15.52■□□□□ 0.08
PTPRA-205ENST00000399903 ZNF223Q9UK11 482 aaPredicted RBP15.52■□□□□ 0.08
PTPRA-205ENST00000399903 A0A1W2PQU0 124 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 OR2F2O95006 317 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 H2AFB1P0C5Y9 115 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 POU4F2Q12837 409 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 OR2F1Q13607 317 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 TRMT12Q53H54 448 aaKnown RBP15.52■□□□□ 0.07
PTPRA-205ENST00000399903 CORO6Q6QEF8 472 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 UPB1Q9UBR1 384 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 VPS13AQ96RL7 3174 aa15.52■□□□□ 0.07
PTPRA-205ENST00000399903 LRRC72A6NJI9 287 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 PRR32B1ATL7 298 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 H7C1C5 153 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF208O43345 1280 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 SMIM6P0DI80 62 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 SLC2A5P22732 501 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 ADH6P28332 368 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 LCN6P62502 163 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 REEP5Q00765 189 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 SQSTM1Q13501 440 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 GAS6Q14393 721 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 MLF2Q15773 248 aaPredicted RBP15.51■□□□□ 0.07
PTPRA-205ENST00000399903 OR10K2Q6IF99 312 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 ADAM5Q6NVV9 412 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 ARHGAP11AQ6P4F7 1023 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 TMEM205Q6UW68 189 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 PLPP7Q8NBV4 271 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 NAA11Q9BSU3 229 aaPredicted RBP15.51■□□□□ 0.07
PTPRA-205ENST00000399903 FITM1A5D6W6 292 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 DUXAA6NLW8 204 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 BLOC1S5-TXNDC5H3BN57 136 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF749O43361 778 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 XRCC3O43542 346 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 PMS2P2O95744 297 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 RNF224P0DH78 156 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 CD80P33681 288 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 DPTQ07507 201 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 TMEM52BQ4KMG9 183 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 NCMAPQ5T1S8 102 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 LIPNQ5VXI9 398 aa15.51■□□□□ 0.07
PTPRA-205ENST00000399903 UQCC3Q6UW78 93 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms