RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 COMMD3-BMI1R4GMX3 469 aa12.16□□□□□ -0.46
VAPB-202ENST00000395802 KIAA1549Q9HCM3 1950 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 PRRC2CQ9Y520 2896 aaKnown RBP12.15□□□□□ -0.46
VAPB-202ENST00000395802 ATMQ13315 3056 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 CCDC182A6NF36 153 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 ZNF701M0R085 212 aaPredicted RBP12.15□□□□□ -0.46
VAPB-202ENST00000395802 PRRG2O14669 202 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 TMCC2O75069 709 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 AQP8O94778 261 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 OR2T7P0C7T2 308 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 ABOP16442 354 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 KLK2P20151 261 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 RIPPLY2Q5TAB7 128 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 GLB1L2Q8IW92 636 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 ACBD7Q8N6N7 88 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 OR52I1Q8NGK6 324 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 OR2T27Q8NH04 317 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 ZNF420Q8TAQ5 688 aaPredicted RBP12.15□□□□□ -0.46
VAPB-202ENST00000395802 KISS1RQ969F8 398 aaPredicted RBP12.15□□□□□ -0.46
VAPB-202ENST00000395802 ISOC1Q96CN7 298 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 SNRNP40Q96DI7 357 aaKnown RBP12.15□□□□□ -0.46
VAPB-202ENST00000395802 TRIB1Q96RU8 372 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 DOK1Q99704 481 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 MND1Q9BWT6 205 aa12.15□□□□□ -0.46
VAPB-202ENST00000395802 ACACBO00763 2458 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 CD8B2A6NJW9 211 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TTLL8A6PVC2 850 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 PHYHO14832 338 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 MYL12BO14950 172 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 KRT33AO76009 404 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 HRGP04196 525 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 LCKP06239 509 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TPOP07202 933 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 CTLA4P16410 223 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ZNF84P51523 738 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 LINC01590Q5TEZ4 76 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 GPR107Q5VW38 600 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 NSUN5P2Q63ZY6 315 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ABHD12BQ7Z5M8 362 aaPredicted RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 EGFL6Q8IUX8 553 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TUSC5Q8IXB3 177 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 C20orf196Q8IYI0 205 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 GPR137CQ8N3F9 429 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 OR51L1Q8NGJ5 315 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ZMYND19Q96E35 227 aaPredicted RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 TSSK2Q96PF2 358 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 INTS14Q96SY0 518 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ADGRL4Q9HBW9 690 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TAS2R16Q9NYV7 291 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 CLCF1Q9UBD9 225 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 EMC9Q9Y3B6 208 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 BSNQ9UPA5 3926 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 DSPP15924 2871 aaKnown RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 IGLV1-36A0A0B4J1U3 117 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 PTHP01270 115 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 IGHA1P01876 353 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 QDPRP09417 244 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 EDN3P14138 238 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ZNF823P16415 610 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 SELENOPP49908 381 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TDGF1P3P51864 188 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ZNF133P52736 654 aaPredicted RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 HSF2Q03933 536 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 STK11Q15831 433 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ACSF3Q4G176 576 aaPredicted RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 C10orf128Q5T292 105 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 GFRALQ6UXV0 394 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 B3GNT6Q6ZMB0 384 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 TMPRSS11AQ6ZMR5 421 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 OR10H4Q8NGA5 316 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 OR5M9Q8NGP3 310 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 APH1AQ96BI3 265 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ZFP3Q96NJ6 502 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 YIPF3Q9GZM5 350 aa12.14□□□□□ -0.47
VAPB-202ENST00000395802 NAA50Q9GZZ1 169 aaKnown RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 FOXD3Q9UJU5 478 aaPredicted RBP12.14□□□□□ -0.47
VAPB-202ENST00000395802 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
VAPB-202ENST00000395802 TMEM129A0AVI4 362 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 DAPL1A0PJW8 107 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 DCTN6O00399 190 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
VAPB-202ENST00000395802 TGM6O95932 706 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 LAP3P28838 519 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 PYCR1P32322 319 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 ACTA2P62736 377 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 ACTG2P63267 376 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 C19orf48Q6RUI8 117 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 SHFQ7M4L6 423 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 OR4F15Q8NGB8 312 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms