RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 CDH20Q9HBT6 801 aa16.29■□□□□ 0.2
TMEM53-201ENST00000372235 HIF3AQ9Y2N7 669 aa16.29■□□□□ 0.2
TMEM53-201ENST00000372235 ABCA1O95477 2261 aa16.29■□□□□ 0.2
TMEM53-201ENST00000372235 SH3PXD2BA1X283 911 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 SNAP29O95721 258 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 ADRA2AP08913 450 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 THBS2P35442 1172 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 AQP2P41181 271 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 MRPS34P82930 218 aaKnown RBP16.28■□□□□ 0.2
TMEM53-201ENST00000372235 TRAM2Q15035 370 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 ALG10Q5BKT4 473 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 RGS7BPQ6MZT1 257 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-201ENST00000372235 CYP4Z1Q86W10 505 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 SPATA3Q8NHX4 192 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 BPIFA2Q96DR5 249 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 CMTM5Q96DZ9 223 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 RBP7Q96R05 134 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 ALG12Q9BV10 488 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 MRPL37Q9BZE1 423 aaKnown RBP16.28■□□□□ 0.2
TMEM53-201ENST00000372235 BCL2L14Q9BZR8 327 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 BPESC1Q9GZL8 116 aa16.28■□□□□ 0.2
TMEM53-201ENST00000372235 LOC100289279A0A1B0GTE1 492 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 ATP8B1O43520 1251 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 TRMUO75648 421 aaKnown RBP16.27■□□□□ 0.2
TMEM53-201ENST00000372235 MT-ND5P03915 603 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 COX4I1P13073 169 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 TNFRSF1BP20333 461 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 SLC9A3P48764 834 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 MRPS11P82912 194 aaKnown RBP16.27■□□□□ 0.2
TMEM53-201ENST00000372235 THEM4Q5T1C6 240 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 HACD2Q6Y1H2 254 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 RRM2BQ7LG56 351 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 OFCC1Q8IZS5 231 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 RBM15BQ8NDT2 890 aaKnown RBP16.27■□□□□ 0.2
TMEM53-201ENST00000372235 C11orf40Q8WZ69 217 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 ZNF347Q96SE7 839 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 SH3GL3Q99963 347 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 CCNB1IP1Q9NPC3 277 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 C20orf141Q9NUB4 165 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 SLCO1C1Q9NYB5 712 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 ARMCX1Q9P291 453 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 A4GNTQ9UNA3 340 aa16.27■□□□□ 0.2
TMEM53-201ENST00000372235 ALPK2Q86TB3 2170 aa16.27■□□□□ 0.19
TMEM53-201ENST00000372235 TLN2Q9Y4G6 2542 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 A6NIZ1 184 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 CXCR6O00574 342 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 TACSTD2P09758 323 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 SAGP10523 405 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-201ENST00000372235 IFI30P13284 250 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-201ENST00000372235 PCMT1P22061 227 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 APLNRP35414 380 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 RAP1BP61224 184 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 RAP1AP62834 184 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 HSF2Q03933 536 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 LIPEQ05469 1076 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 SF3A3Q12874 501 aaKnown RBP eCLIP16.26■□□□□ 0.19
TMEM53-201ENST00000372235 IFI44LQ53G44 452 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 ARMC4Q5T2S8 1044 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 FKBP9P1Q75LS8 142 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 CXXC5Q7LFL8 322 aaKnown RBP16.26■□□□□ 0.19
TMEM53-201ENST00000372235 WDFY1Q8IWB7 410 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 SLC15A3Q8IY34 581 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 WACQ9BTA9 647 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 ANKRD19PQ9H560 264 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 CMTM6Q9NX76 183 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 DUSP13Q9UII6 198 aa16.26■□□□□ 0.19
TMEM53-201ENST00000372235 A0A1W2PPW3 197 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 SHOX2O60902 331 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-201ENST00000372235 GMNNO75496 209 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 ZNF682O95780 498 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 IGHMP01871 453 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 RPL27P61353 136 aaKnown RBP16.25■□□□□ 0.19
TMEM53-201ENST00000372235 PCBD1P61457 104 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 CD47Q08722 323 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 PCGF3Q3KNV8 242 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 CBLL1Q75N03 491 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 OAFQ86UD1 273 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 ZNF584Q8IVC4 421 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 ALDH16A1Q8IZ83 802 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 POU5F2Q8N7G0 328 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 SYT14Q8NB59 555 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 ZNF519Q8TB69 540 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 SNX33Q8WV41 574 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 ACOT11Q8WXI4 607 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-201ENST00000372235 TMEM158Q8WZ71 300 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 RDH5Q92781 318 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 CHODLQ9H9P2 273 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 EIF3KQ9UBQ5 218 aaKnown RBP16.25■□□□□ 0.19
TMEM53-201ENST00000372235 RPS6KA6Q9UK32 745 aa16.25■□□□□ 0.19
TMEM53-201ENST00000372235 ZANQ9Y493 2812 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 IGHV4-61A0A0C4DH41 118 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 AHCYL1O43865 530 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 PATE4P0C8F1 98 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 ACHEP22303 614 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 UCP2P55851 309 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 TMEM33P57088 247 aa16.24■□□□□ 0.19
TMEM53-201ENST00000372235 KLF3P57682 345 aaPredicted RBP16.24■□□□□ 0.19
TMEM53-201ENST00000372235 PRKCDQ05655 676 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms