RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 B4DXG7 233 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 PRR23D1E9PI22 279 aaPredicted RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 M0R129 80 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 GABRPO00591 440 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 LYRM1O43325 122 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 RNF13O43567 381 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 PLPP2O43688 288 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 SCO2O43819 266 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 TSPAN2O60636 221 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 GATBO75879 557 aaKnown RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ARL6IP5O75915 188 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 IGFBP1P08833 259 aaPredicted RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 PRR23D2P0DMB1 279 aaPredicted RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 GLI4P10075 376 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 CELP19835 753 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 SOX18P35713 384 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 CTBP2P56545 445 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 FABP5Q01469 135 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 HSF2Q03933 536 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 CRYZQ08257 329 aaKnown RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 MAB21L1Q13394 359 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 IL18Q14116 193 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 TESK1Q15569 626 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 HSPB2Q16082 182 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 SLC25A35Q3KQZ1 300 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 HBMQ6B0K9 141 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF767PQ75MW2 155 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF550Q7Z398 422 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 NANOGNBQ7Z5D8 188 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 GRAMD2AQ8IUY3 354 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 LNX2Q8N448 690 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ARIH2OSQ8N7S6 290 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ATP6V1C2Q8NEY4 427 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 TMEM239Q8WW34 195 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 NTNG2Q96CW9 530 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 C16orf58Q96GQ5 468 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 HYLS1Q96M11 299 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 GNRHR2Q96P88 292 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ADOQ96SZ5 270 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 SDF2Q99470 211 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 KCNJ15Q99712 375 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ATF6BQ99941 703 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 TMEM43Q9BTV4 400 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 PRDM14Q9GZV8 571 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 EGLN3Q9H6Z9 239 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 EMC3Q9P0I2 261 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 COMMD3Q9UBI1 195 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 ING4Q9UNL4 249 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 FAM215AQ9Y5M1 114 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 WIF1Q9Y5W5 379 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 PHF3Q92576 2039 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 TRAV1-2A0A0B4J238 106 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 RIIAD1A6NNX1 92 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 J3QRE1 110 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 PDCD5O14737 125 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 EPPINO95925 133 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 C1QBP02746 253 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 NID1P14543 1247 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 IGFBP2P18065 325 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 C4BPBP20851 252 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 RPS4Y1P22090 263 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 SRD5A2P31213 254 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 SLC6A6P31641 620 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CLDN20P56880 219 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 RPS25P62851 125 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 EEF1A1P68104 462 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 PSG6Q00889 435 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 TLE4Q04727 773 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CD300CQ08708 224 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 FOXD4Q12950 439 aaPredicted RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 FNDC7Q5VTL7 733 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 VASNQ6EMK4 673 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 THOC7Q6I9Y2 204 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 RTL6Q6ICC9 239 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CNIH2Q6PI25 160 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 NPSR1Q6W5P4 371 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 MEX3BQ6ZN04 569 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 FRRS1Q6ZNA5 592 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 LHFPL3Q86UP9 236 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 VRK2Q86Y07 508 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CPOQ8IVL8 374 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CMIPQ8IY22 773 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 RPRMLQ8N4K4 120 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 OR14L1PQ8NHC6 308 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 SPRYD4Q8WW59 207 aaPredicted RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 TMEM203Q969S6 136 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 GIMAP5Q96F15 307 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 YIPF4Q9BSR8 244 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 LMF2Q9BU23 707 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 C11orf54Q9H0W9 315 aaPredicted RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 RANBP3Q9H6Z4 567 aaPredicted RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 MCCC2Q9HCC0 563 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CMC2Q9NRP2 79 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CYSLTR2Q9NS75 346 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 DKKL1Q9UK85 242 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms