RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 WDFY1Q8IWB7 410 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 FBXL14Q8N1E6 418 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 SLC7A6OSQ96CW6 309 aaPredicted RBP16.12■□□□□ 0.17
CHTOP-202ENST00000368687 TRMT61AQ96FX7 289 aaKnown RBP16.12■□□□□ 0.17
CHTOP-202ENST00000368687 CLPTM1LQ96KA5 538 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 ZNF570Q96NI8 536 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 TSPAN32Q96QS1 320 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 KCNN2Q9H2S1 579 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 C1orf198Q9H425 327 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 B3GNT2Q9NY97 397 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 FBXO9Q9UK97 447 aaPredicted RBP16.12■□□□□ 0.17
CHTOP-202ENST00000368687 ZNF346Q9UL40 294 aaKnown RBP16.12■□□□□ 0.17
CHTOP-202ENST00000368687 LAMP3Q9UQV4 416 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 LYVE1Q9Y5Y7 322 aa16.12■□□□□ 0.17
CHTOP-202ENST00000368687 VSTM5A8MXK1 200 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 TNFRSF11BO00300 401 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 PTP4A3O75365 173 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 SEC14L2O76054 403 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 PTHP01270 115 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 DANCRP0C864 163 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 IDH3GP51553 393 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-202ENST00000368687 MRPS34P82930 218 aaKnown RBP16.11■□□□□ 0.17
CHTOP-202ENST00000368687 ETFDHQ16134 617 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 OR2T5Q6IEZ7 315 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 C1orf94Q6P1W5 598 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 TMEM53Q6P2H8 277 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 MDP1Q86V88 176 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 MEX3DQ86XN8 651 aaKnown RBP16.11■□□□□ 0.17
CHTOP-202ENST00000368687 OR2T29Q8NH02 315 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 FANK1Q8TC84 345 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 GNPDA2Q8TDQ7 276 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 HDAC2Q92769 488 aaKnown RBP16.11■□□□□ 0.17
CHTOP-202ENST00000368687 REEP1Q9H902 201 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 SIAEQ9HAT2 523 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 NRIP3Q9NQ35 241 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 ZNF701Q9NV72 531 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-202ENST00000368687 ATP23Q9Y6H3 246 aa16.11■□□□□ 0.17
CHTOP-202ENST00000368687 DHRS12A0PJE2 317 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 ATP6V1G2-DDX39BF2Z307 99 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 HLA-HP01893 362 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 SLC6A6P31641 620 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 APOBEC3AP31941 199 aaPredicted RBP16.1■□□□□ 0.17
CHTOP-202ENST00000368687 TTKP33981 857 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 ERVK-25P63136 954 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 TUBA1BP68363 451 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 TUBA4AP68366 448 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 NKX6-1P78426 367 aaPredicted RBP16.1■□□□□ 0.17
CHTOP-202ENST00000368687 SPOCK1Q08629 439 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 NPRL3Q12980 569 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 TSPAN31Q12999 210 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 PGGHGQ32M88 737 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 TUBA1AQ71U36 451 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 SLC16A14Q7RTX9 510 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 FAM122BQ7Z309 247 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 ZER1Q7Z7L7 766 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 IGFN1Q86VF2 1251 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 MUC15Q8N387 334 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 NUP37Q8NFH4 326 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 NMD3Q96D46 503 aaKnown RBP16.1■□□□□ 0.17
CHTOP-202ENST00000368687 WACQ9BTA9 647 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 CBLN4Q9NTU7 201 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 MOKQ9UQ07 419 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 SPEF1Q9Y4P9 236 aa16.1■□□□□ 0.17
CHTOP-202ENST00000368687 E7EQL1 145 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 OVOL3O00110 214 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 IMPA2O14732 288 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 IDH3BO43837 385 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 CCNB2O95067 398 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 TXNDC12O95881 172 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 GSSP48637 474 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 PTDSS1P48651 473 aaKnown RBP16.09■□□□□ 0.17
CHTOP-202ENST00000368687 FABP6P51161 128 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 RAB1AP62820 205 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 MYBPC1Q00872 1141 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 KRR1Q13601 381 aaKnown RBP16.09■□□□□ 0.17
CHTOP-202ENST00000368687 NEUROG1Q92886 237 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 TRAF4Q9BUZ4 470 aaPredicted RBP16.09■□□□□ 0.17
CHTOP-202ENST00000368687 ADAM18Q9Y3Q7 739 aa16.09■□□□□ 0.17
CHTOP-202ENST00000368687 SAMHD1Q9Y3Z3 626 aaKnown RBP16.09■□□□□ 0.17
CHTOP-202ENST00000368687 MTORP42345 2549 aa16.08■□□□□ 0.17
CHTOP-202ENST00000368687 PRSS37A4D1T9 235 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 GSC2O15499 205 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 SLC2A10O95528 541 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 SERPINA5P05154 406 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 SOD3P08294 240 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF14P17017 642 aaPredicted RBP16.08■□□□□ 0.16
CHTOP-202ENST00000368687 GSTM3P21266 225 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 GIPRP48546 466 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 PTH2RP49190 550 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 PLP2Q04941 152 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 RFX4Q33E94 735 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 PGBD2Q6P3X8 592 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 SLC25A47Q6Q0C1 308 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 TGIF2LYQ8IUE0 185 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 SKA3Q8IX90 412 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 OR52L1Q8NGH7 329 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 CHID1Q9BWS9 393 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 OR52D1Q9H346 318 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF442Q9H7R0 627 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 BARX1Q9HBU1 254 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms