RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GSG1LQ6UXU4 331 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 CENPUQ71F23 418 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF571Q7Z3V5 609 aaPredicted RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 PSTKQ8IV42 348 aaKnown RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 FNDC8Q8TC99 324 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 NAT14Q8WUY8 206 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 TADA1Q96BN2 335 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF514Q96K75 400 aaPredicted RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 C4orf36Q96KX1 117 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 FARSBQ9NSD9 589 aaKnown RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 SHANK1Q9Y566 2161 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 CHD5Q8TDI0 1954 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 NIPBLQ6KC79 2804 aaeCLIP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 MED13Q9UHV7 2174 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 IGHV3OR16-12A0A075B7B8 117 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 C1orf232A0A0U1RR37 186 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF487B1APH4 448 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 CASKO14936 926 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 LRRTM2O43300 516 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 HCRTR1O43613 425 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 GALR3O60755 368 aaPredicted RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 DPM1O60762 260 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SCRG1O75711 98 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLC25A14O95258 325 aaPredicted RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANP32DO95626 131 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 JCHAINP01591 159 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SNRPCP09234 159 aaKnown RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 DRD5P21918 477 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 KPNA2P52292 529 aaKnown RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 CDH6P55285 790 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 RIPPLY3P57055 190 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLC25A11Q02978 314 aaKnown RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 GBE1Q04446 702 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ABRAXAS2Q15018 415 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 TPD52L1Q16890 204 aaPredicted RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLX4IPQ5VYV7 408 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 NCBP2-AS2Q69YL0 99 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 IGFL3Q6UXB1 125 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 Q6ZS92 163 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ATPAF2Q8N5M1 289 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 PQLC3Q8N755 202 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 MAPK1IP1LQ8NDC0 245 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR5AU1Q8NGC0 362 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 RFESDQ8TAC1 157 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF671Q8TAW3 534 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ITLN1Q8WWA0 313 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 TRIM44Q96DX7 344 aaPredicted RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 SPATA16Q9BXB7 569 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 POLR1EQ9GZS1 481 aaKnown RBP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 CLSTN2Q9H4D0 955 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 PARVAQ9NVD7 372 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 RBM22Q9NW64 420 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 CHRNA9Q9UGM1 479 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 ESPL1Q14674 2120 aa4.39□□□□□ -1.71
RNU4-39P-201ENST00000362455 DOCK4Q8N1I0 1966 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 PDZK1P1A8MUH7 402 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 KCNK1O00180 336 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 KMOO15229 486 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 TM9SF1O15321 606 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 UGT1A9O60656 530 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 POP7O75817 140 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 CDK14O94921 469 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANXA3P12429 323 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 PVRP15151 417 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 PCK1P35558 622 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 HMGCLP35914 325 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 GABRA4P48169 554 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 KRTAP10-9P60411 292 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 RPL26P61254 145 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 UBE2HP62256 183 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 RPS15P62841 145 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 SNTB2Q13425 540 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 CRMP1Q14194 572 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 DPYSL3Q14195 570 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 PAFAH1B3Q15102 231 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANKDD1AQ495B1 522 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLC36A3Q495N2 470 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 BOLA3Q53S33 107 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 CYBRD1Q53TN4 286 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLC34A3Q8N130 599 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 TRAM1L1Q8N609 369 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR6T1Q8NGN1 323 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 RASL10AQ92737 203 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 TIMM29Q9BSF4 260 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 SLC25A51Q9H1U9 297 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 UGT1A7Q9HAW7 530 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 UGT1A10Q9HAW8 530 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 UGT1A8Q9HAW9 530 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 IL26Q9NPH9 171 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 HRASLS2Q9NWW9 162 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 UTP6Q9NYH9 597 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 PAK5Q9P286 719 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 PSMD13Q9UNM6 376 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 RPL26L1Q9UNX3 145 aaKnown RBP4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 RNF6Q9Y252 685 aa4.38□□□□□ -1.71
RNU4-39P-201ENST00000362455 BTRCQ9Y297 605 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms