RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 MAGEA1P43355 309 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CEBPDP49716 269 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMBIM6P55061 237 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MRPS6P82932 125 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 OTUD4Q01804 1114 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MERTKQ12866 999 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 EXOC3L2Q2M3D2 409 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MORN2Q502X0 79 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CLLU1Q5K131 121 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 NXNL2Q5VZ03 156 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MFSD12Q6NUT3 480 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CATSPERDQ86XM0 798 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 BOD1L2Q8IYS8 172 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DND1Q8IYX4 353 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 Q8N1X5 172 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MS4A15Q8N5U1 240 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF248Q8NDW4 579 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR11H4Q8NGC9 324 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 KCNG3Q8TAE7 436 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR5P2Q8WZ92 322 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PPWD1Q96BP3 646 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ISOC1Q96CN7 298 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 VSTM2LQ96N03 204 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR2A7Q96R45 310 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF184Q99676 751 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 C11orf1Q9H5F2 150 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 NMNAT1Q9HAN9 279 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 Q9UF83 564 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MTRF1LQ9UGC7 380 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GINS2Q9Y248 185 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 BTRCQ9Y297 605 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FKBP7Q9Y680 259 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3DA0A087WVF3 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3IA0A087WXS9 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3EA0A087X179 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3KA0A087X1G2 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 A0A1B0GX12 115 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 METTL21EPA6NDL7 271 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3BA6NDS4 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3FA6NER0 549 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DDTLA6NHG4 134 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3LB9A6J9 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PLA2G10O15496 165 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRKYO43930 277 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SERPINB2P05120 415 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3HP0C7X1 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MCF2P10911 925 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 BMP7P18075 431 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SAT1P21673 171 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MAGEA2P43356 314 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GPR12P47775 334 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CDH11P55287 796 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 LIM2P55344 173 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 LINC00310P59036 64 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 HEPACAMQ14CZ8 416 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 EXOC3L4Q17RC7 722 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF630Q2M218 657 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SYT6Q5T7P8 510 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CARD17Q5XLA6 110 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3GQ6DHY5 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3CQ6IPX1 549 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GDPD3Q7L5L3 318 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GOLGA7Q7Z5G4 137 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DCP1BQ8IZD4 617 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBC1D3Q8IZP1 549 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CLIP4Q8N3C7 705 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SDR9C7Q8NEX9 313 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MCOLN3Q8TDD5 553 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 L3HYPDHQ96EM0 354 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ELMO2Q96JJ3 720 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FAM213AQ9BRX8 229 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TBL1XR1Q9BZK7 514 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 NPFFR1Q9GZQ6 430 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TUBA4BQ9H853 241 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FKRPQ9H9S5 495 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PNRC2Q9NPJ4 139 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PFDN4Q9NQP4 134 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CHD3Q12873 2000 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DOCK8Q8NF50 2099 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 NPIPB9F8W1W9 429 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 GOLGA8RI6L899 631 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 FPGTO14772 594 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 TIMM23O14925 209 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 PPP1R2P9O14990 202 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 TSHBP01222 138 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 SERPING1P05155 500 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 RCC1P18754 421 aaPredicted RBP1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 HPCAL1P37235 193 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 FMO5P49326 533 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 TSPAN5P62079 268 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 FPGSQ05932 587 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 KDSRQ06136 332 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC39A6Q13433 755 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC17A1Q14916 467 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 TCTN1Q2MV58 587 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 MIDNQ504T8 468 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 CYBRD1Q53TN4 286 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 PAQR7Q86WK9 346 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 CNGA4Q8IV77 575 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 KIAA0895Q8NCT3 520 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms