RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ADAM10O14672 748 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 MRPL19P49406 292 aaKnown RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 CSNK1G2P78368 415 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 AADACL4Q5VUY2 407 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 FBXO46Q6PJ61 603 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 SMIM4Q8WVI0 70 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 KLF15Q9UIH9 416 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 KLK8O60259 260 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ACAA1P09110 424 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 LIMS3P0CW19 117 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 LIMS4P0CW20 117 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 SLC26A5P58743 744 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 CSNK2A1P68400 391 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 RPL19P84098 196 aaKnown RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 DEFB133Q30KQ1 61 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 UEVLDQ8IX04 471 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 CSNK2A3Q8NEV1 391 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 MAN2C1Q9NTJ4 1040 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 CBLCQ9ULV8 474 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 HHLA2Q9UM44 414 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF337Q9Y3M9 751 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF705FA8MVS1 300 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 SNRPGP15A8MWD9 76 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 GFYI3L273 518 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 GPRIN2O60269 458 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 OR2F2O95006 317 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF705DP0CH99 300 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF705BP0CI00 300 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 RPS2P15880 293 aaKnown RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 OR2F1Q13607 317 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 TCTN3Q6NUS6 607 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM91Q6ZNR0 172 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 RHOUQ7L0Q8 258 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ORAI1Q96D31 301 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 ESRP2Q9H6T0 727 aaKnown RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 TUBG2Q9NRH3 451 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 UBQLN4Q9NRR5 601 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 MED17Q9NVC6 651 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 SEMA7AO75326 666 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 PMP2P02689 132 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 DRD1P21728 446 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 OPRD1P41143 372 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 HENMT1Q5T8I9 393 aaKnown RBP14.76□□□□□ -0.05
NPHP3-201ENST00000337331 TOMM40LQ969M1 308 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 EPHX3Q9H6B9 360 aa14.76□□□□□ -0.05
NPHP3-201ENST00000337331 PTPRFP10586 1907 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 SLC5A10A0PJK1 596 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 MAN2B1O00754 1011 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 OPN1LWP04000 364 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF44P15621 663 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 TANGO2Q6ICL3 276 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 ETFRF1Q6IPR1 90 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 ACOT7LQ6ZUV0 252 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 RNF113BQ8IZP6 322 aaKnown RBP14.75□□□□□ -0.05
NPHP3-201ENST00000337331 OR1S1Q8NH92 325 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 TERB2Q8NHR7 220 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 AKR1E2Q96JD6 320 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 PBDC1Q9BVG4 233 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 HEXA-AS1Q9H8Q6 139 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 F5H5K5 113 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 K7ESM1 405 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 ALDH3B1P43353 468 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 DLX2Q07687 328 aaPredicted RBP14.75□□□□□ -0.05
NPHP3-201ENST00000337331 EBPQ15125 230 aaKnown RBP14.75□□□□□ -0.05
NPHP3-201ENST00000337331 ABHD17CQ6PCB6 329 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 MBOAT2Q6ZWT7 520 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 MFSD9Q8NBP5 474 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 FAM71CQ8NEG0 241 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 BBS1Q8NFJ9 593 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 NUBPLQ8TB37 319 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 SPSB2Q99619 263 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 TSPAN10Q9H1Z9 355 aaPredicted RBP14.75□□□□□ -0.05
NPHP3-201ENST00000337331 AP4M1O00189 453 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 IGLV3-27P01718 113 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 DAOP14920 347 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 MAKP20794 623 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 REEP5Q00765 189 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 SPACA1Q9HBV2 294 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 A4GALTQ9NPC4 353 aa14.75□□□□□ -0.05
NPHP3-201ENST00000337331 hCG_1809904A0A1W2PP81 198 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 A0A1W2PR64 198 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 A0A1W2PRV1 198 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 DCTN6O00399 190 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 SLC33A1O00400 549 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 CRTAPO75718 401 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 SLC2A10O95528 541 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 IGHA2P01877 340 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 TEAD1P28347 426 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 SLC6A12P48065 614 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 GPR18Q14330 331 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 RPL22L1Q6P5R6 122 aaKnown RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM255BQ8WV15 326 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 DERL3Q96Q80 235 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 UBQLN3Q9H347 655 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 RHOFQ9HBH0 211 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 UBE2J1Q9Y385 318 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 CDHR4A6H8M9 788 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 MAGEB4O15481 346 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms