RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CUBNO60494 3623 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 MCIDASD6RGH6 385 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 M0R233 179 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 CCDC22O60826 627 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 SNAP29O95721 258 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 PATE4P0C8F1 98 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 NR2C1P13056 603 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 SF3A3Q12874 501 aaKnown RBP eCLIP15.26■□□□□ 0.03
HDDC3-201ENST00000330334 RIN1Q13671 783 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 LRRC23Q53EV4 343 aaPredicted RBP15.26■□□□□ 0.03
HDDC3-201ENST00000330334 SLC15A3Q8IY34 581 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 SLC30A7Q8NEW0 376 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 NOXO1Q8NFA2 376 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 RCN3Q96D15 328 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 NMD3Q96D46 503 aaKnown RBP15.26■□□□□ 0.03
HDDC3-201ENST00000330334 TPD52L3Q96J77 140 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 ZNF347Q96SE7 839 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 TXNIPQ9H3M7 391 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 SIAEQ9HAT2 523 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 ARMCX1Q9P291 453 aa15.26■□□□□ 0.03
HDDC3-201ENST00000330334 LOC100289279A0A1B0GTE1 492 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 ZNF16P17020 682 aaPredicted RBP15.25■□□□□ 0.03
HDDC3-201ENST00000330334 MDH1P40925 334 aaKnown RBP15.25■□□□□ 0.03
HDDC3-201ENST00000330334 CHN2P52757 468 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 MRPS11P82912 194 aaKnown RBP15.25■□□□□ 0.03
HDDC3-201ENST00000330334 MRPS34P82930 218 aaKnown RBP15.25■□□□□ 0.03
HDDC3-201ENST00000330334 LAPTM4AQ15012 233 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 ANKDD1AQ495B1 522 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 UGT2A3Q6UWM9 527 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 SLC16A14Q7RTX9 510 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 SYT14Q8NB59 555 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 OR1J2Q8NGS2 313 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 MOSPD2Q8NHP6 518 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 FNDC8Q8TC99 324 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 BPIFA2Q96DR5 249 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 SHARPINQ9H0F6 387 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 KCNS2Q9ULS6 477 aa15.25■□□□□ 0.03
HDDC3-201ENST00000330334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDDC3-201ENST00000330334 MALRD1Q5VYJ5 2156 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 GMNCA6NCL1 334 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 NDUFAB1O14561 156 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 LILRA1O75019 489 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 MMP7P09237 267 aaPredicted RBP15.24■□□□□ 0.03
HDDC3-201ENST00000330334 COX4I1P13073 169 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 RAD52P43351 418 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 PLP2Q04941 152 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 ALG10Q5BKT4 473 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 C8orf82Q6P1X6 216 aaPredicted RBP15.24■□□□□ 0.03
HDDC3-201ENST00000330334 HACD2Q6Y1H2 254 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 RNF113BQ8IZP6 322 aaKnown RBP15.24■□□□□ 0.03
HDDC3-201ENST00000330334 OFCC1Q8IZS5 231 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 POU5F2Q8N7G0 328 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 C1orf159Q96HA4 380 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 ALG12Q9BV10 488 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 LRMDAQ9H2I8 198 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 RNF121Q9H920 327 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 EFCAB1Q9HAE3 211 aa15.24■□□□□ 0.03
HDDC3-201ENST00000330334 ZNF346Q9UL40 294 aaKnown RBP15.24■□□□□ 0.03
HDDC3-201ENST00000330334 IGLV3-9A0A075B6K5 115 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 IQCMA0A1B0GVH7 501 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 IGHMP01871 453 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 IFNW1P05000 195 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 ZNF250P15622 560 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 SELENOVP59797 346 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 LIPEQ05469 1076 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 PRKCDQ05655 676 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 TBC1D28Q2M2D7 210 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 THEM4Q5T1C6 240 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 FAM205BPQ63HN1 556 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 RGS7BPQ6MZT1 257 aaPredicted RBP15.23■□□□□ 0.03
HDDC3-201ENST00000330334 CBLL1Q75N03 491 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 LRP11Q86VZ4 500 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 FAM156AQ8NDB6 213 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 RBM15BQ8NDT2 890 aaKnown RBP15.23■□□□□ 0.03
HDDC3-201ENST00000330334 ZNF519Q8TB69 540 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 GEMIN6Q8WXD5 167 aaKnown RBP15.23■□□□□ 0.03
HDDC3-201ENST00000330334 HDAC2Q92769 488 aaKnown RBP15.23■□□□□ 0.03
HDDC3-201ENST00000330334 SYT3Q9BQG1 590 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 BCL2L14Q9BZR8 327 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 KCNN2Q9H2S1 579 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 CHODLQ9H9P2 273 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 MAN2C1Q9NTJ4 1040 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 GPR160Q9UJ42 338 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 UGT2A1Q9Y4X1 527 aa15.23■□□□□ 0.03
HDDC3-201ENST00000330334 CXCR6O00574 342 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 FFAR1O14842 300 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 TGFAP01135 160 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 IFI30P13284 250 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 IGFBP5P24593 272 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 ALDH3B1P43353 468 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 UCP2P55851 309 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 TMEM33P57088 247 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 RPL27P61353 136 aaKnown RBP15.22■□□□□ 0.03
HDDC3-201ENST00000330334 MYBPC1Q00872 1141 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 TRAM2Q15035 370 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 ELFN2Q5R3F8 820 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 FAM27BQ5VT28 67 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 SLC25A47Q6Q0C1 308 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 VTCN1Q7Z7D3 282 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 PAQR4Q8N4S7 273 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms