RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 WDR5BQ86VZ2 330 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 OR14A16Q8NHC5 309 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 MUL1Q969V5 352 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 ZNF486Q96H40 463 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 NIPAL2Q9H841 368 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SHPRHQ149N8 1683 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 LRIT2A6NDA9 550 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 H0YIV9 168 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 TNFSF8P32971 234 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 MRPS21P82921 87 aaKnown RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 HMGN3Q15651 99 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 OR10K2Q6IF99 312 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 TMEM200AQ86VY9 491 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 CDS1Q92903 461 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SEC22AQ96IW7 307 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 QRSL1Q9H0R6 528 aaKnown RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 HPNP05981 417 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 UBA52P62987 128 aaKnown RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 SLC7A6Q92536 515 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 ANKRD10Q9NXR5 420 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 EBF1Q9UH73 591 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 I6L893 689 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 HIST1H1TP22492 207 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 OR10A3P58181 314 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 YPEL5P62699 121 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 OXA1LQ15070 435 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 PXDC1Q5TGL8 231 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 LMNTD1Q8N9Z9 388 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 ZNF778Q96MU6 729 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 UFSP2Q9NUQ7 469 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 CBLCQ9ULV8 474 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 PRAMEF25A6NGN4 478 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 G3V2L1 256 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 GPR75O95800 540 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 PIPP12273 146 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 TNFRSF1BP20333 461 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 TMEM176BQ3YBM2 270 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 PRAMEF5Q5TYX0 476 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 PRAMEF6Q5VXH4 476 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 NEIL2Q969S2 332 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 MED17Q9NVC6 651 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 RAB19A4D1S5 217 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 NPIPB15A6NHN6 443 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 DRGXA6NNA5 263 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 ARPC1BO15143 372 aaKnown RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 PMP2P02689 132 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 NME2P22392 152 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SSTR4P31391 388 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 AAED1Q7RTV5 226 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SFTPA2Q8IWL1 248 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SFTPA1Q8IWL2 248 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 DTWD2Q8NBA8 298 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 AAMDCQ9H7C9 122 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SLC16A7O60669 478 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 HPGDSO60760 199 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 GM2AP17900 193 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 SDC1P18827 310 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 TPPP2P59282 170 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 MEPCEQ7L2J0 689 aaKnown RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 ANKLE1Q8NAG6 615 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 ENPP5Q9UJA9 477 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 IGKV6D-21A0A0A0MT36 114 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 TOX4O94842 621 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 NQO2P16083 231 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 GLYR1Q49A26 553 aaPredicted RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 HBMQ6B0K9 141 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 MRPS24Q96EL2 167 aaKnown RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 PIKFYVEQ9Y2I7 2098 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 XRN1Q8IZH2 1706 aaKnown RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 TMEM269A0A1B0GVZ9 245 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 GYPBP06028 91 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 CPEP16870 476 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 POU3F1Q03052 451 aaPredicted RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 LTBQ06643 244 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 Q56UQ5 140 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 IER5LQ5T953 404 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 C20orf24Q9BUV8 137 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 OR2J1Q9GZK6 312 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 MRPS2Q9Y399 296 aaKnown RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 A0A087WZY1 265 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 MLLT11Q13015 90 aaPredicted RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 ZMAT1Q5H9K5 638 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 OR2B11Q5JQS5 317 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 APOOLQ6UXV4 268 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 OR52E1Q8NGJ3 308 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 MED9Q9NWA0 146 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 C5AR2Q9P296 337 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 INTS6Q9UL03 887 aaKnown RBP11.15□□□□□ -0.62
PCF11-201ENST00000298281 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
PCF11-201ENST00000298281 YKT6O15498 198 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 COX7A2P2O60397 106 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 CD38P28907 300 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms