RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PFN4Q8NHR9 129 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 RAB40AQ8WXH6 277 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 TMEM246Q9BRR3 403 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 OR52A5Q9H2C5 316 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 EMC7Q9NPA0 242 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 GPR173Q9NS66 373 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 P4HTMQ9NXG6 502 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 KIF25Q9UIL4 384 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 WDR37Q9Y2I8 494 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 A0A1W2PR48 441 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 M0QZ24 198 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 HOXB5P09067 269 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 CTGFP29279 349 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 EPHA8P29322 1005 aaPredicted RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 PTGS2P35354 604 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ZNF93P35789 620 aaPredicted RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 DSCR4P56555 118 aaPredicted RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 S100A12P80511 92 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ALKBH1Q13686 389 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 C6orf89Q6UWU4 347 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 CD300LGQ6UXG3 332 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 DOK3Q7L591 496 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 BBS1Q8NFJ9 593 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ROBO4Q8WZ75 1007 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 MRGPRX4Q96LA9 322 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 KCNJ15Q99712 375 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 FBXL4Q9UKA2 621 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ZNF346Q9UL40 294 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 FRG2CA6NGY1 282 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 UBFD1O14562 309 aaKnown RBP6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 LYRM1O43325 122 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 CLN5O75503 358 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 ZNF133P52736 654 aaPredicted RBP6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 MFGE8Q08431 387 aaPredicted RBP6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 FGFBP1Q14512 234 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 THEM4Q5T1C6 240 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 C1orf53Q5VUE5 145 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 BPIFB2Q8N4F0 458 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 OR51A2Q8NGJ7 313 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 OR14A2Q96R54 314 aa6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 THAP7Q9BT49 309 aaPredicted RBP6.34□□□□□ -1.4
GAPVD1-202ENST00000297933 LTBP4Q8N2S1 1624 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ACOD1A6NK06 481 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 GABRPO00591 440 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ARPC1BO15143 372 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 GLAP06280 429 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 RAB4AP20338 218 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 NFYAP23511 347 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 GABRB3P28472 473 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 PNLIPRP2P54317 469 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 BAXQ07812 192 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 SARGQ9BW04 601 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 SMIM3Q9BZL3 60 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 RIMS4Q9H426 269 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ESRP2Q9H6T0 727 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 PDFQ9HBH1 243 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 MYO9BQ13459 2157 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 MSTNO14793 375 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 HPGDSO60760 199 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 GUSBP08236 651 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 PIPP12273 146 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 IL7P13232 177 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 IGFBP6P24592 240 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 SLC9A3R2Q15599 337 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 NXNL2Q5VZ03 156 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 SHEQ5VZ18 495 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 FAM199XQ6PEV8 388 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 BATF2Q8N1L9 274 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 OR2I1PQ8NGU4 316 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 GGHQ92820 318 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 TSNAXQ99598 290 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 TCEAL2Q9H3H9 227 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 IGHV3-64DA0A0J9YX35 117 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 CLDN24A6NM45 220 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 LCMT2O60294 686 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 CLDN1O95832 211 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 OR8U8P0C7N1 319 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ZNF728P0DKX0 622 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 PGFP49763 221 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 CRMP1Q14194 572 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ADPRMQ3LIE5 342 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 PIWIL3Q7Z3Z3 882 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 CLDN22Q8N7P3 220 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ABHD11Q8NFV4 315 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 CPNE4Q96A23 557 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 DPCDQ9BVM2 203 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 FSCN3Q9NQT6 498 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 SLC22A11Q9NSA0 550 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 SELENOFO60613 162 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 ADH4P08319 380 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 F2RP25116 425 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 FABP6P51161 128 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 TAS2R30P59541 319 aa6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 MLLT11Q13015 90 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-202ENST00000297933 Q499Y3 187 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms