RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CXorf67Q86X51 503 aaPredicted RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 SLC37A3Q8NCC5 494 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 SDR9C7Q8NEX9 313 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 ZNF837Q96EG3 531 aaPredicted RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 NMNAT3Q96T66 252 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 SYT4Q9H2B2 425 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 VCXQ9H320 206 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 NELFAQ9H3P2 528 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 TOR3AQ9H497 397 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 RIBC2Q9H4K1 309 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 NDRG4Q9ULP0 352 aaKnown RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 CACNA1CQ13936 2221 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 IGLV1-36A0A0B4J1U3 117 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 H7C1C5 153 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 SNAP29O95721 258 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 RENP00797 406 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 PPP3CBP16298 524 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 CTLA4P16410 223 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 ZNF3P17036 446 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 CRABP1P29762 137 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 GGT2P36268 569 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 LCN6P62502 163 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 MRPS34P82930 218 aaKnown RBP12.39□□□□□ -0.43
VPS25-201ENST00000253794 FMODQ06828 376 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 KEAP1Q14145 624 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 CRMP1Q14194 572 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 ANKRD16Q6P6B7 361 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 P2RY8Q86VZ1 359 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 OR1K1Q8NGR3 316 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 KISS1RQ969F8 398 aaPredicted RBP12.39□□□□□ -0.43
VPS25-201ENST00000253794 SLC38A2Q96QD8 506 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 VCX3BQ9H321 246 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 FAM118AQ9NWS6 357 aa12.39□□□□□ -0.43
VPS25-201ENST00000253794 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
VPS25-201ENST00000253794 ANKHD1Q8IWZ3 2542 aaKnown RBP12.39□□□□□ -0.43
VPS25-201ENST00000253794 LYZL6O75951 148 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 SLC2A10O95528 541 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 PTDSS1P48651 473 aaKnown RBP12.38□□□□□ -0.43
VPS25-201ENST00000253794 ZNF84P51523 738 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
VPS25-201ENST00000253794 DNM1P34Q6PK57 102 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
VPS25-201ENST00000253794 OR6V1Q8N148 313 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 GALNT4Q8N4A0 578 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 TRUB1Q8WWH5 349 aaKnown RBP12.38□□□□□ -0.43
VPS25-201ENST00000253794 BCL2L2Q92843 193 aaPredicted RBP12.38□□□□□ -0.43
VPS25-201ENST00000253794 NABP1Q96AH0 204 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 FOXB1Q99853 325 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 NUAK2Q9H093 628 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 OBP2BQ9NPH6 170 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 TMEM38BQ9NVV0 291 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 B9D1Q9UPM9 204 aa12.38□□□□□ -0.43
VPS25-201ENST00000253794 ARPC4-TTLL3A0A0A6YYG9 625 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 LOC100130705A0A1B0GUX0 176 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 OR5H1A6NKK0 313 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 H0YAE9 185 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 DCTN6O00399 190 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 PRODHO43272 600 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 KHDRBS3O75525 346 aaKnown RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 NPR2P20594 1047 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 PAICSP22234 425 aaKnown RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 PAX7P23759 505 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 GRNP28799 593 aaKnown RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 CENPAP49450 140 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 CDC42P60953 191 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 ADARB1P78563 741 aaKnown RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 SNAPC1Q16533 368 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 KCNMB1Q16558 191 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 ZIK1Q3SY52 487 aaPredicted RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 TIMM23BQ5SRD1 257 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 SLC25A30Q5SVS4 291 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 GLB1L2Q8IW92 636 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 CCDC36Q8IYA8 594 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 CYB561A3Q8NBI2 242 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 OR8J1Q8NGP2 316 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 OR2T4Q8NH00 348 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 TMEM163Q8TC26 289 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 PTP4A1Q93096 173 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 SIAEQ9HAT2 523 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 HINT3Q9NQE9 182 aaKnown RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 RPRD1BQ9NQG5 326 aaKnown RBP12.37□□□□□ -0.43
VPS25-201ENST00000253794 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 TVP23BQ9NYZ1 205 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 HCFC1P51610 2035 aa12.37□□□□□ -0.43
VPS25-201ENST00000253794 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 PRKYO43930 277 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 SLC16A7O60669 478 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 RAD51DO75771 328 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 CLDN1O95832 211 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 HRGP04196 525 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 GAAP10253 952 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms