RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 SHC1P29353 583 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 OR7A5Q15622 319 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 MS4A18Q3C1V0 323 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 FAM27D1Q5T7N8 215 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 DDI2Q5TDH0 399 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 NR2C2APQ86WQ0 139 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 TEX19Q8NA77 164 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 POLE4Q9NR33 117 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 B9D1Q9UPM9 204 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 NCKAP5O14513 1909 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 A0A1W2PRG6 482 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 PINLYPA6NC86 204 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 FAM47E-STBD1D6RA91 191 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 PFDN1O60925 122 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 AKR7A3O95154 331 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 DPP4P27487 766 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 PSMB10P40306 273 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 DSCR4P56555 118 aaPredicted RBP20.24■□□□□ 0.83
CDX1-201ENST00000231656 ARG2P78540 354 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 PUDPQ08623 228 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 ZNF79Q15937 498 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 ACSM3Q53FZ2 586 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 SLC22A16Q86VW1 577 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 OR13C5Q8NGS8 318 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 MNTQ99583 582 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 FAM173AQ9BQD7 235 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 MED12Q93074 2177 aa20.24■□□□□ 0.83
CDX1-201ENST00000231656 ANKRD11Q6UB99 2663 aaPredicted RBP20.24■□□□□ 0.83
CDX1-201ENST00000231656 A0A087WZY1 265 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 LRRC3CA6NJW4 275 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 LIPT2A6NK58 231 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 TCEA1P23193 301 aaKnown RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 CFL1P23528 166 aaKnown RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 EDNRAP25101 427 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 RPS11P62280 158 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDX1-201ENST00000231656 FOXK1P85037 733 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 FOXO1Q12778 655 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 IGFL2Q6UWQ7 119 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 H1FNTQ75WM6 255 aaPredicted RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 OR2M7Q8NG81 312 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 ADAD1Q96M93 576 aaKnown RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 DCBLD2Q96PD2 775 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 WDR76Q9H967 626 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 CHST11Q9NPF2 352 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 IGLV1-36A0A0B4J1U3 117 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 TRBV2A0A0J9YWF9 115 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 SLC22A23A1A5C7 686 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 RRP8O43159 456 aaKnown RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 GPANK1O95872 356 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 SERPINA3P01011 423 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 SP1P08047 785 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 HLA-DOBP13765 273 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 GLYR1Q49A26 553 aaPredicted RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 EGFL6Q8IUX8 553 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 SULF2Q8IWU5 870 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 KDM8Q8N371 416 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 ZBTB8AQ96BR9 441 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 KLHL15Q96M94 604 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 INTS14Q96SY0 518 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 ZFP64Q9NPA5 681 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 ALKBH4Q9NXW9 302 aa20.23■□□□□ 0.83
CDX1-201ENST00000231656 MRM2Q9UI43 246 aaKnown RBP20.23■□□□□ 0.83
CDX1-201ENST00000231656 NPIPB13A6NJU9 1138 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 NPIPB4C9JG80 1138 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 PSMD9O00233 223 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 NME2P1O60361 137 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 ABHD16AO95870 558 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 TFPIP10646 304 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 NME2P22392 152 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 EIF1P41567 113 aaKnown RBP20.22■□□□□ 0.83
CDX1-201ENST00000231656 PPP3R1P63098 170 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 TLE3Q04726 772 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 MELKQ14680 651 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 SLC25A25Q6KCM7 469 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 KCTD20Q7Z5Y7 419 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 OR5M1Q8NGP8 315 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 SLC39A7Q92504 469 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 SRRQ9GZT4 340 aa20.22■□□□□ 0.83
CDX1-201ENST00000231656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDX1-201ENST00000231656 BOKQ9UMX3 212 aaPredicted RBP20.22■□□□□ 0.83
CDX1-201ENST00000231656 H3BML4 177 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 ZIC3O60481 467 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 RFPL3SP0C7P2 107 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 PSKH1P11801 424 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 CD46P15529 392 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 ALOX5APP20292 161 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 ADH6P28332 368 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 ZMAT1Q5H9K5 638 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 PAMR1Q6UXH9 720 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 TPRA1Q86W33 373 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 OR6N2Q8NGY6 317 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 ASB10Q8WXI3 467 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 FANCFQ9NPI8 374 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 SERINC1Q9NRX5 453 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 COMMD3Q9UBI1 195 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 DKKL1Q9UK85 242 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 KLF13Q9Y2Y9 288 aaPredicted RBP20.21■□□□□ 0.83
CDX1-201ENST00000231656 GPRIN2O60269 458 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 UPK3AO75631 287 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 OR8G3PP0DMU2 310 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms