RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 H3BVH4 76 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 S100A7P31151 101 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 ZNF385BQ569K4 471 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 FAM69AQ5T7M9 428 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 ETFRF1Q6IPR1 90 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 TMEM88Q6PEY1 159 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 DPPA4Q7L190 304 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 TMEM135Q86UB9 458 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 CDRT4Q8N9R6 151 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 ZFP62Q8NB50 900 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 UBTD1Q9HAC8 227 aa15.69■□□□□ 0.1
CACNA1A-253ENST00000637927 C20orf202A1L168 122 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 PRAMEF25A6NGN4 478 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 AQP9O43315 295 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 OR7C2O60412 319 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 OR2F2O95006 317 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 HPRP00739 348 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 INHBCP55103 352 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 KCNJ8Q15842 424 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 PRAMEF5Q5TYX0 476 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 PRAMEF6Q5VXH4 476 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 GFRALQ6UXV0 394 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 LRRTM1Q86UE6 522 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 C15orf54Q8N8G6 183 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 ACY3Q96HD9 319 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 SPACA5Q96QH8 159 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 USP22Q9UPT9 525 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 PRRG2O14669 202 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 SSSCA1O60232 199 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 PPIAP62937 165 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 CATR1Q13166 79 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 VWA2Q5GFL6 755 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 DHRS7BQ6IAN0 325 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 ACSM6Q6P461 480 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 APH1AQ96BI3 265 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 MRPS28Q9Y2Q9 187 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 ENPP4Q9Y6X5 453 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 SPANXN5Q5MJ07 72 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 RNF170Q96K19 258 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 ZNF749O43361 778 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 ZNF207O43670 478 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 TNFSF15O95150 251 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 MEP1BQ16820 701 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 DTWD1Q8N5C7 304 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 MRPL43Q8N983 215 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 DTWD2Q8NBA8 298 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 RAB3CQ96E17 227 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 CRISPLD2Q9H0B8 497 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 ZC3H12DA2A288 527 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 H0YGG7 62 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 KLK10O43240 276 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 WNT11O96014 354 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 TNFRSF4P43489 277 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 RPE65Q16518 533 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 NT5DC2Q9H857 520 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 FBXO8Q9NRD0 319 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 HAX1O00165 279 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 SIX6O95475 246 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 TEKQ02763 1124 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 MRPL2Q5T653 305 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 FAM71CQ8NEG0 241 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 POFUT1Q9H488 388 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 NFAT5O94916 1531 aa15.68■□□□□ 0.1
CACNA1A-253ENST00000637927 PRSS45Q7RTY3 260 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 BLNKQ8WV28 456 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 ZNF582Q96NG8 517 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 NMNAT3Q96T66 252 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 SCML1Q9UN30 329 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 RCE1Q9Y256 329 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 FAM189A1O60320 539 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 PDCD1Q15116 288 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 OR2G6Q5TZ20 316 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 C17orf107Q6ZR85 190 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 ADGRG5Q8IZF4 528 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 OR10V1Q8NGI7 309 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 CGGBP1Q9UFW8 167 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 RNF212BA8MTL3 300 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 M0QZQ0 153 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 PPIHO43447 177 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 PCBD1P61457 104 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 HNRNPA1L2Q32P51 320 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 SPATS1Q496A3 300 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 THSD4Q6ZMP0 1018 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 TMEM123Q8N131 208 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 ACOXLQ9NUZ1 547 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 ZCWPW2A0A1B0GU75 182 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 PRTGQ2VWP7 1150 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 SLC39A11Q8N1S5 342 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 C19orf47Q8N9M1 422 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 FER1L6-AS2Q96M78 137 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 CLSTN3Q9BQT9 956 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 KATNB1Q9BVA0 655 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 ZDHHC5Q9C0B5 715 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 OR2B2Q9GZK3 357 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 ZNF576Q9H609 170 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 NPC1O15118 1278 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 UBCP0CG48 685 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 TRAPPC2P0DI81 140 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 TRAPPC2BP0DI82 140 aa15.67■□□□□ 0.1
CACNA1A-253ENST00000637927 MS4A2Q01362 244 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms