RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 FNDC8Q8TC99 324 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 TMEM54Q969K7 222 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 NMD3Q96D46 503 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 DDOQ99489 341 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 LINC00470Q9BZP3 86 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 SLCO5A1Q9H2Y9 848 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 C12orf49Q9H741 205 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 TVP23BQ9NYZ1 205 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 CAPGP40121 348 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 CSNK1A1P48729 337 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 EFNB1P98172 346 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 SNAPC1Q16533 368 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 JAZF1Q86VZ6 243 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 POMGNT2Q8NAT1 580 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 LILRB4Q8NHJ6 448 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 CYGBQ8WWM9 190 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 TFAP2CQ92754 450 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 NMNAT3Q96T66 252 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 PIGMQ9H3S5 423 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 VSX1Q9NZR4 365 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 PROCRQ9UNN8 238 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 GMPPBQ9Y5P6 360 aa17.52■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC22A23A1A5C7 686 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC2A10O95528 541 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 CNOT4O95628 575 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 NR2C1P13056 603 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF3P17036 446 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 PCYT1AP49585 367 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 CLRN1P58418 232 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 CDC42P60953 191 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 TSPO2Q5TGU0 170 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 CARD17Q5XLA6 110 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 LEG1Q6P5S2 330 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 LIX1LQ8IVB5 337 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 SYT14Q8NB59 555 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC37A3Q8NCC5 494 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 SDR9C7Q8NEX9 313 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 OR6N1Q8NGY5 312 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 GLTPQ9NZD2 209 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 MALT1Q9UDY8 824 aa17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 FLNBO75369 2602 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-221ENST00000622702 FAM90A27PA6NNH2 459 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 PRSS44E7EML9 344 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 DVL2O14641 736 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 UPK3AO75631 287 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 RENP00797 406 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF133P52736 654 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 CD47Q08722 323 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 ITGADQ13349 1161 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 CRMP1Q14194 572 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 THEM4Q5T1C6 240 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 DEPDC4Q8N2C3 294 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 FAM81AQ8TBF8 368 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 TRUB1Q8WWH5 349 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 PLEKHA8Q96JA3 519 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 RBP7Q96R05 134 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF184Q99676 751 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 FN3KQ9H479 309 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC7A10Q9NS82 523 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 KLF2Q9Y5W3 355 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 OR6C68A6NDL8 312 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 H7C1C5 153 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 MSTNO14793 375 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 PRKYO43930 277 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 BMP5P22003 454 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 LCN6P62502 163 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 LGALS3BPQ08380 585 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 IL18R1Q13478 541 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 PHYHD1Q5SRE7 291 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 FBXW9Q5XUX1 488 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 LRFN4Q6PJG9 635 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 GPR137CQ8N3F9 429 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 OR8J1Q8NGP2 316 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 APOL4Q9BPW4 351 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 SYT4Q9H2B2 425 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 B3GAT2Q9NPZ5 323 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 IMPAD1Q9NX62 359 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 PRSS50Q9UI38 385 aa17.5■□□□□ 0.39
PDLIM2-221ENST00000622702 NKX2-6A6NCS4 301 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 M0R3G1 203 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 SMNDC1O75940 238 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 IGHV3-9P01782 118 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 COL8A1P27658 744 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC25A1P53007 311 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 C6orf52Q5T4I8 152 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF691Q5VV52 312 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 USP51Q70EK9 711 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 TCEANCQ8N8B7 351 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 CYB561A3Q8NBI2 242 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 RELL2Q8NC24 303 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 TMEM163Q8TC26 289 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 MCHR2Q969V1 340 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 ALKBH3Q96Q83 286 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 ULBP2Q9BZM5 246 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 NMNAT2Q9BZQ4 307 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 KCNJ16Q9NPI9 418 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 ASB6Q9NWX5 421 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 JKAMPQ9P055 326 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms