RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 CNOT2Q9NZN8 540 aaKnown RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 MOKQ9UQ07 419 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 LRIT2A6NDA9 550 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 SOCS6O14544 535 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 MITFO75030 526 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 MED6O75586 246 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 AKR7A3O95154 331 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 GABRA4P48169 554 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 UBE2G2P60604 165 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TSPAN31Q12999 210 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 C2orf76Q3KRA6 126 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 CST9LP1Q5W188 147 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TFAP2CQ92754 450 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TMEM38AQ9H6F2 299 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TAPBPO15533 448 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 SGCEO43556 437 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 C1orf140Q5VVS0 124 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 H1FNTQ75WM6 255 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TRILQ7L0X0 811 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 LINC00346Q8IVM7 164 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 GTPBP8Q8N3Z3 284 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 OR5M9Q8NGP3 310 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 OLIG1Q8TAK6 271 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 FAM122AQ96E09 287 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 CMTM3Q96MX0 182 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 C1QTNF3Q9BXJ4 246 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 SELENOIQ9C0D9 397 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 RNF32Q9H0A6 362 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 DAPP1Q9UN19 280 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 PRRC2BQ5JSZ5 2229 aaKnown RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TCRBV3S1A0A5B6 114 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 TSPAN11A1L157 253 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 OR6C65A6NJZ3 312 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 HOXC4P09017 264 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 LIM2P55344 173 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 OR2A2Q6IF42 318 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 CYP4V2Q6ZWL3 525 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-219ENST00000606715 CD163Q86VB7 1156 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 SERPINA12Q8IW75 414 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 ZNF679Q8IYX0 411 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 ABHD11Q8NFV4 315 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 PIGLQ9Y2B2 252 aa10.13□□□□□ -0.79
SHANK2-219ENST00000606715 DSCR3O14972 297 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ITGAMP11215 1152 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 GABRG2P18507 467 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 BCKDHBP21953 392 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 CLDN6P56747 220 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 GRB2P62993 217 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 FAM53BQ14153 422 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 IHHQ14623 411 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 Q6ZSR9 355 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 PDZD9Q8IXQ8 264 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 MORN4Q8NDC4 146 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ZFP90Q8TF47 636 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 TRMT61AQ96FX7 289 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 OR52A5Q9H2C5 316 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 MRPS28Q9Y2Q9 187 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 K7ESM1 405 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ALDOCP09972 364 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 DRD5P21918 477 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ELAVL4P26378 380 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 HLA-DMAP28067 261 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 PGFP49763 221 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 SHEQ5VZ18 495 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 Q7L0L9 218 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 GRINAQ7Z429 371 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 CARFQ8N187 725 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 MS4A6EQ96DS6 147 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ANKRD60Q9BZ19 345 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 RIMS4Q9H426 269 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 NARFLQ9H6Q4 476 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 VAMP5O95183 116 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 PIPP12273 146 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 SLC6A12P48065 614 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 VEGFCP49767 419 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 PPP2CBP62714 309 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 PPP2CAP67775 309 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 MFSD12Q6NUT3 480 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 LPCAT3Q6P1A2 487 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ANKRD16Q6P6B7 361 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 DND1Q8IYX4 353 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 FAM109AQ8N4B1 249 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 SIMC1Q8NDZ2 872 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 ELP4Q96EB1 424 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 GLIPR2Q9H4G4 154 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 HEYLQ9NQ87 328 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 MTCH2Q9Y6C9 303 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 CLDN1O95832 211 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 UBCP0CG48 685 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 IGFBP6P24592 240 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 CLDN15P56746 228 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 WDR5BQ86VZ2 330 aa10.12□□□□□ -0.79
SHANK2-219ENST00000606715 PPIL3Q9H2H8 161 aaKnown RBP10.12□□□□□ -0.79
SHANK2-219ENST00000606715 FAM183AA6NL82 134 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms