RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CPEP16870 476 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 NAA10P41227 235 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 CAPZA2P47755 286 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 STARP49675 285 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 HSF2Q03933 536 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC10A1Q14973 349 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 POU4F3Q15319 338 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 SSX1Q16384 188 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 DNM1P34Q6PK57 102 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 ZNF511Q8NB15 262 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 OR6X1Q8NH79 312 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 MRPL48Q96GC5 212 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 ADGRG7Q96K78 797 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 RERGLQ9H628 205 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 MARCH7Q9H992 704 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 ACKR4Q9NPB9 350 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TIGARQ9NQ88 270 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 ACOT7O00154 380 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 AIREO43918 545 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 RAMP1O60894 148 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 CELA3AP09093 270 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 OCM2P0CE71 109 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 OCMP0CE72 109 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 NR4A1P22736 598 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 GADD45AP24522 165 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 CD79BP40259 229 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TPBGQ13641 420 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TIMM50Q3ZCQ8 353 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 ATCAYQ86WG3 371 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TIGD4Q8IY51 512 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 FAM109AQ8N4B1 249 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 CHPT1Q8WUD6 406 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TM9SF4Q92544 642 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 ADAD1Q96M93 576 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 MNTQ99583 582 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TIMP4Q99727 224 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 MRPL13Q9BYD1 178 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 BABAM2Q9NXR7 383 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 KLHL13Q9P2N7 655 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 TRAV17A0A0B4J275 112 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 CENPBD1B2RD01 187 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 H0YC42 278 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC22A1O15245 554 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 AKAP8O43823 692 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 MT-ND5P03915 603 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 KLK2P20151 261 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 ENPP1P22413 925 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SUCLG1P53597 346 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 HCCSP53701 268 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 BDH1Q02338 343 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 C1QTNF12Q5T7M4 302 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 PHC2Q8IXK0 858 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 UBQLNLQ8IYU4 475 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SYT14Q8NB59 555 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SMAP2Q8WU79 429 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC25A44Q96H78 314 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 RBP7Q96R05 134 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 EMC6Q9BV81 110 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SF3B5Q9BWJ5 86 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SRXN1Q9BYN0 137 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 TMEM165Q9HC07 324 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC35F4A4IF30 521 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 ZNF726A6NNF4 738 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC34A2O95436 690 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 CTLA4P16410 223 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 LHX2P50458 406 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 BCAP31P51572 246 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 PSMD7P51665 324 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 ACTA2P62736 377 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 ACTG2P63267 376 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 BCL2A1Q16548 175 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 LYPD4Q6UWN0 246 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 OR10D3Q8NH80 312 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 UFD1Q92890 307 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 UCN2Q96RP3 112 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC6A15Q9H2J7 730 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 ISG20L2Q9H9L3 353 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 B3GNT3Q9Y2A9 372 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 CSAG2Q9Y5P2 127 aa15.75■□□□□ 0.11
SHKBP1-224ENST00000600718 NCKAP5O14513 1909 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 ZNF670-ZNF695F2Z2N8 137 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 CXCL13O43927 109 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 KHDRBS3O75525 346 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 IGHG1P01857 330 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 CLDN15P56746 228 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 NFATC3Q12968 1075 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC17A1Q14916 467 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 THEM4Q5T1C6 240 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 LIPKQ5VXJ0 399 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 CREB3L2Q70SY1 520 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 KLBQ86Z14 1044 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 WDFY1Q8IWB7 410 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 SYS1Q8N2H4 156 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 CENPSQ8N2Z9 138 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 RPL3LQ92901 407 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 INTS14Q96SY0 518 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 NDUFB11Q9NX14 153 aa15.74■□□□□ 0.11
SHKBP1-224ENST00000600718 IGHV3-15A0A0B4J1V0 119 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 A0A1W2PPW3 197 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms