RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TMPRSS3P57727 454 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 OR2G6Q5TZ20 316 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 LRRC69Q6ZNQ3 347 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 MEIOBQ8N635 442 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 ZNF511Q8NB15 262 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 OR10H4Q8NGA5 316 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 YIPF6Q96EC8 236 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 ZNF845Q96IR2 970 aaPredicted RBP18.52■□□□□ 0.56
PNKP-203ENST00000593946 ADAD1Q96M93 576 aaKnown RBP18.52■□□□□ 0.56
PNKP-203ENST00000593946 LDAHQ9H6V9 325 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 DAPL1A0PJW8 107 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 NPIPA2E9PIF3 369 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 NPIPA3F8WFD2 350 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 K7EM74 188 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 IGHG1P01857 330 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 LIPAP38571 399 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 CD79BP40259 229 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 GALEQ14376 348 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 TBR1Q16650 682 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 ARMCX4Q5H9R4 360 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 TIGD4Q8IY51 512 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 NOXO1Q8NFA2 376 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 OR52N1Q8NH53 320 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 ZNF420Q8TAQ5 688 aaPredicted RBP18.52■□□□□ 0.55
PNKP-203ENST00000593946 TBX5Q99593 518 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 TIMP4Q99727 224 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 FUNDC2Q9BWH2 189 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 RERGLQ9H628 205 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 MARCH7Q9H992 704 aa18.52■□□□□ 0.55
PNKP-203ENST00000593946 RSL24D1Q9UHA3 163 aaKnown RBP18.52■□□□□ 0.55
PNKP-203ENST00000593946 ZNF716A6NP11 495 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 ZNF701M0R085 212 aaPredicted RBP18.51■□□□□ 0.55
PNKP-203ENST00000593946 OR2T7P0C7T2 308 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 HSMCR30P0CW71 290 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 TGFBR2P37173 567 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 PLA2G5P39877 138 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 CENPAP49450 140 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 CLDN17P56750 224 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 SRYQ05066 204 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 FMODQ06828 376 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 CAMK2DQ13557 499 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 SLC35F2Q8IXU6 374 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 KLHL36Q8N4N3 616 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 RBMXL3Q8N7X1 1067 aaKnown RBP18.51■□□□□ 0.55
PNKP-203ENST00000593946 OR2T27Q8NH04 317 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 SMAP2Q8WU79 429 aaPredicted RBP18.51■□□□□ 0.55
PNKP-203ENST00000593946 ROBO4Q8WZ75 1007 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 ISOC1Q96CN7 298 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 NMD3Q96D46 503 aaKnown RBP18.51■□□□□ 0.55
PNKP-203ENST00000593946 OPALINQ96PE5 141 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 ALG8Q9BVK2 526 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 NAA50Q9GZZ1 169 aaKnown RBP18.51■□□□□ 0.55
PNKP-203ENST00000593946 SPRR3Q9UBC9 169 aa18.51■□□□□ 0.55
PNKP-203ENST00000593946 CAB39Q9Y376 341 aaPredicted RBP18.51■□□□□ 0.55
PNKP-203ENST00000593946 A0A1W2PQL4 384 aaPredicted RBP18.5■□□□□ 0.55
PNKP-203ENST00000593946 BLVRAP53004 296 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 RPS3AP61247 264 aaKnown RBP18.5■□□□□ 0.55
PNKP-203ENST00000593946 ZNF85Q03923 595 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 ETFDHQ16134 617 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 DNM1P34Q6PK57 102 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 SLC16A9Q7RTY1 509 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 ZIC4Q8N9L1 334 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 ZNF385AQ96PM9 386 aaKnown RBP18.5■□□□□ 0.55
PNKP-203ENST00000593946 DOK1Q99704 481 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 EXO5Q9H790 373 aa18.5■□□□□ 0.55
PNKP-203ENST00000593946 PAQR5Q9NXK6 330 aaPredicted RBP18.5■□□□□ 0.55
PNKP-203ENST00000593946 CENPBD1B2RD01 187 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 CYTIPO60759 359 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 SCG5P05408 212 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 HCCSP53701 268 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 TMBIM6P55061 237 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 CLRN1P58418 232 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 MLLT11Q13015 90 aaPredicted RBP18.49■□□□□ 0.55
PNKP-203ENST00000593946 HIST3H3Q16695 136 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 THEM4Q5T1C6 240 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ZNF322Q6U7Q0 402 aaPredicted RBP18.49■□□□□ 0.55
PNKP-203ENST00000593946 FCRLAQ7L513 359 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ANKRD13BQ86YJ7 626 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 SNRNP27Q8WVK2 155 aaKnown RBP18.49■□□□□ 0.55
PNKP-203ENST00000593946 TAAR6Q96RI8 345 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ARHGAP9Q9BRR9 750 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 FLVCR1Q9Y5Y0 555 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 CHD8Q9HCK8 2581 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 PHF3Q92576 2039 aaKnown RBP18.49■□□□□ 0.55
PNKP-203ENST00000593946 IGKV1D-43A0A0B4J1Z2 117 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 TVP23AA6NH52 213 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ZNF726A6NNF4 738 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 GPANK1O95872 356 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 CPN1P15169 458 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 PTGS2P35354 604 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 RGS6P49758 472 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 GLO1Q04760 184 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 TMPRSS11AQ6ZMR5 421 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 SLC16A12Q6ZSM3 486 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 SSX6Q7RTT6 188 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ERI1Q8IV48 349 aaKnown RBP18.49■□□□□ 0.55
PNKP-203ENST00000593946 RFLNBQ8N5W9 214 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 GATAD2BQ8WXI9 593 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 EXTL1Q92935 676 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ABHD17AQ96GS6 310 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms