RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CD79AP11912 226 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 CALCRP30988 508 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 RRM2P31350 389 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 ACVR1BP36896 505 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 CDKN1AP38936 164 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 LIMS1P48059 325 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 SLC9A3P48764 834 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 IDH3GP51553 393 aaPredicted RBP16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 FMODQ06828 376 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 NPRL3Q12980 569 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 TRIM25Q14258 630 aaKnown RBP16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 ZBED5Q49AG3 693 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 DHFR2Q86XF0 187 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 ZDHHC21Q8IVQ6 265 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 SKA3Q8IX90 412 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 LRRC75A-AS1Q8N1F1 130 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 GTPBP3Q969Y2 492 aaKnown RBP16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 GPA33Q99795 319 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 DHRS9Q9BPW9 319 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 THTPAQ9BU02 230 aa16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 TRAF4Q9BUZ4 470 aaPredicted RBP16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 MAP1AP78559 2803 aaPredicted RBP16.23■□□□□ 0.19
PPP4R1-215ENST00000580182 ITPR3Q14573 2671 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 F8P00451 2351 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 SH3PXD2BA1X283 911 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 NPIPB13A6NJU9 1138 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 NPIPB4C9JG80 1138 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 PTP4A3O75365 173 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 SLC2A10O95528 541 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 IGHMP01871 453 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 RPL27P61353 136 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 ERVK-25P63136 954 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 NAAAQ02083 359 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 Q5PR19 223 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 LCN8Q6JVE9 175 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 SLC22A24Q8N4F4 322 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 FAM169BQ8N8A8 192 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 CCDC124Q96CT7 223 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 NMD3Q96D46 503 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 ZNF75AQ96N20 296 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 KCNK17Q96T54 332 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 SH3GL3Q99963 347 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 KATNB1Q9BVA0 655 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 GSX2Q9BZM3 304 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 CXorf56Q9H5V9 222 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 ZNF701Q9NV72 531 aaPredicted RBP16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 TMEM38BQ9NVV0 291 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 SIGLEC7Q9Y286 467 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 TMEM5Q9Y2B1 443 aa16.22■□□□□ 0.19
PPP4R1-215ENST00000580182 USF3Q68DE3 2245 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 CENPBD1B2RD01 187 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 OVOL3O00110 214 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 PAX7P23759 505 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 TTKP33981 857 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 ARR3P36575 388 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 FABP6P51161 128 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 FXYD6P3P58550 94 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 TAF11Q15544 211 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 GSG1Q2KHT4 349 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 C3orf36Q3SXR2 165 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 ANKDD1AQ495B1 522 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 PIWIL3Q7Z3Z3 882 aaKnown RBP16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 HDDC2Q7Z4H3 204 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 ZER1Q7Z7L7 766 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 DTX2Q86UW9 622 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 CCDC36Q8IYA8 594 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 ZNF519Q8TB69 540 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 SLC7A6OSQ96CW6 309 aaPredicted RBP16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 MS4A3Q96HJ5 214 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 TMUB1Q9BVT8 246 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 MUC13Q9H3R2 512 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 IL20RAQ9UHF4 553 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 ADAM18Q9Y3Q7 739 aa16.21■□□□□ 0.19
PPP4R1-215ENST00000580182 H7C1C5 153 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 CRYAAP02489 173 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 PAX1P15863 534 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 CDAP32320 146 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 RPL4P36578 427 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 GIPRP48546 466 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 PTDSS1P48651 473 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 ZNF133P52736 654 aaPredicted RBP16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 SMIM11AP58511 58 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 LCN6P62502 163 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 RAB1AP62820 205 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 CD47Q08722 323 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 MTX3Q5HYI7 312 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 SHEQ5VZ18 495 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 THSD4Q6ZMP0 1018 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 YTHDF3Q7Z739 585 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 NSMAFQ92636 917 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 ASB9Q96DX5 294 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 RSRC1Q96IZ7 334 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 KCNS3Q9BQ31 491 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 FAIMQ9NVQ4 179 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 AURKCQ9UQB9 309 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 ARID1AO14497 2285 aa16.2■□□□□ 0.18
PPP4R1-215ENST00000580182 UNC119BA6NIH7 251 aa16.19■□□□□ 0.18
PPP4R1-215ENST00000580182 ACOT8O14734 319 aa16.19■□□□□ 0.18
PPP4R1-215ENST00000580182 GYG2O15488 501 aa16.19■□□□□ 0.18
PPP4R1-215ENST00000580182 NDUFS7O75251 213 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms