RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 FAM46AQ96IP4 442 aaKnown RBP12.59□□□□□ -0.39
MKS1-207ENST00000578789 CLPTM1LQ96KA5 538 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 ALG12Q9BV10 488 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 KATNB1Q9BVA0 655 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 GSX2Q9BZM3 304 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 KRCC1Q9NPI7 259 aaPredicted RBP12.59□□□□□ -0.39
MKS1-207ENST00000578789 TMEM38BQ9NVV0 291 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 CISD1Q9NZ45 108 aaKnown RBP12.59□□□□□ -0.39
MKS1-207ENST00000578789 ZNF224Q9NZL3 707 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 SIGLEC7Q9Y286 467 aa12.59□□□□□ -0.39
MKS1-207ENST00000578789 HEATR1Q9H583 2144 aaKnown RBP12.59□□□□□ -0.39
MKS1-207ENST00000578789 E7EQL1 145 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ATP6V1G2-DDX39BF2Z307 99 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ACOT8O14734 319 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ENTPD5O75356 428 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 SOD3P08294 240 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 QDPRP09417 244 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 NR2C1P13056 603 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ZNF26P17031 533 aaPredicted RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 RRM2P31350 389 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ARR3P36575 388 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 CTXN1P60606 82 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 NAAAQ02083 359 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 TRAP1Q12931 704 aaKnown RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 TOP3AQ13472 1001 aaPredicted RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 MDP1Q86V88 176 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 IGFN1Q86VF2 1251 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 DEPDC4Q8N2C3 294 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 NANOS1Q8WY41 292 aaKnown RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 CCDC124Q96CT7 223 aaKnown RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 ZNF75AQ96N20 296 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 GPX7Q96SL4 187 aaPredicted RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 DHRS9Q9BPW9 319 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 TRAF4Q9BUZ4 470 aaPredicted RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 NDEL1Q9GZM8 345 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 CXorf56Q9H5V9 222 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 DENND2DQ9H6A0 471 aaPredicted RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 SMURF2Q9HAU4 748 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ZNF701Q9NV72 531 aaPredicted RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 FAIMQ9NVQ4 179 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 ZNF346Q9UL40 294 aaKnown RBP12.58□□□□□ -0.4
MKS1-207ENST00000578789 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.4
MKS1-207ENST00000578789 A6NIZ1 184 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 OVOL3O00110 214 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 GYG2O15488 501 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 PTP4A3O75365 173 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 HLA-HP01893 362 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 CD14P08571 375 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 ACVR1BP36896 505 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 PTH2RP49190 550 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 HMGA2P52926 109 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 FXYD6P3P58550 94 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 RAP1BP61224 184 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 RAP1AP62834 184 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 SHEQ5VZ18 495 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 ZNF544Q6NX49 715 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 PGM2L1Q6PCE3 622 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 FAM122BQ7Z309 247 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 MYPOPQ86VE0 399 aaPredicted RBP12.57□□□□□ -0.4
MKS1-207ENST00000578789 SLC22A24Q8N4F4 322 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 FNDC8Q8TC99 324 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 SEC61A2Q9H9S3 476 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 NOX3Q9HBY0 568 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 POU2F3Q9UKI9 436 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 MOKQ9UQ07 419 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 AURKCQ9UQB9 309 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 LYVE1Q9Y5Y7 322 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 F8P00451 2351 aa12.57□□□□□ -0.4
MKS1-207ENST00000578789 UNC119BA6NIH7 251 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 MGRN1O60291 552 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 KRT36O76013 467 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 UBL3O95164 117 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 NDUFB2O95178 105 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 CD8AP01732 235 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 CRYAAP02489 173 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 CELA3BP08861 270 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 OR8G3PP0DMU2 310 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 FPR3P25089 353 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 CALCRP30988 508 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 TTKP33981 857 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 CAPZA2P47755 286 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 ZNF84P51523 738 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
MKS1-207ENST00000578789 ADAM8P78325 824 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
MKS1-207ENST00000578789 MYBPC1Q00872 1141 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 BNIP1Q12981 228 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 GSG1Q2KHT4 349 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 FAM98BQ52LJ0 330 aaKnown RBP12.56□□□□□ -0.4
MKS1-207ENST00000578789 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 PRSS57Q6UWY2 283 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 DPPA2Q7Z7J5 298 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 ZER1Q7Z7L7 766 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms