RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 BMP4P12644 408 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ACADSP16219 412 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 TCN1P20061 433 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-208ENST00000558827 NPR2P20594 1047 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 MSX2P35548 267 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-208ENST00000558827 GNGT1P63211 74 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 FMODQ06828 376 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ST3GAL3Q11203 375 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ARPINQ7Z6K5 226 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 CPLX4Q7Z7G2 160 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 LRP11Q86VZ4 500 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 PRIMA1Q86XR5 153 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 CDK20Q8IZL9 346 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 SLC22A24Q8N4F4 322 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 FAM156AQ8NDB6 213 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ASB10Q8WXI3 467 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 PRRC1Q96M27 445 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF75AQ96N20 296 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 FOXN4Q96NZ1 517 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 HOPXQ9BPY8 73 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-208ENST00000558827 KCTD14Q9BQ13 255 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-208ENST00000558827 SYT3Q9BQG1 590 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 TPK1Q9H3S4 243 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 TMEM38BQ9NVV0 291 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 ADA2Q9NZK5 511 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 YLPM1P49750 1951 aaKnown RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 IGKV1D-43A0A0B4J1Z2 117 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 KIAA1324LA8MWY0 1029 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 B9A039 149 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 LYNX1G3V0Z9 82 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 DIRAS1O95057 198 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 F12P00748 615 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 IGHG1P01857 330 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 IFNW1P05000 195 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 ADRA2AP08913 450 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 FAM157BP0CG42 384 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 OR8G3PP0DMU2 310 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 LYNX1P0DP58 116 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 SAGP10523 405 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF14P17017 642 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 RBM34P42696 430 aaKnown RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 GPR4P46093 362 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 CTXN1P60606 82 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 GGTLC2Q14390 218 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 MAD2L1BPQ15013 274 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 SGCAQ16586 387 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 IFI44LQ53G44 452 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 GKAP1Q5VSY0 366 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 C8orf82Q6P1X6 216 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 CBLL1Q75N03 491 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 CCDC36Q8IYA8 594 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 PAQR4Q8N4S7 273 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 FAM169BQ8N8A8 192 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 OR13C2Q8NGS9 318 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 C10orf105Q8TEF2 133 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 HDAC2Q92769 488 aaKnown RBP10.81□□□□□ -0.68
SMAD3-208ENST00000558827 BPIFA2Q96DR5 249 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 TNFRSF13CQ96RJ3 184 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 DOK1Q99704 481 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 MYLK2Q9H1R3 596 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 PLK3Q9H4B4 646 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 DYNLRB1Q9NP97 96 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 MAN2C1Q9NTJ4 1040 aa10.81□□□□□ -0.68
SMAD3-208ENST00000558827 A0A096LNT2 108 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 GMNCA6NCL1 334 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 H7C1C5 153 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 SNX3O60493 162 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 NR4A1P22736 598 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 IFNA8P32881 189 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 LSP1P33241 339 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ALDH3B1P43353 468 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 PDLIM4P50479 330 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 LCN6P62502 163 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 CD47Q08722 323 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 TRAM2Q15035 370 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 C3orf36Q3SXR2 165 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ALG10Q5BKT4 473 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ARMC4Q5T2S8 1044 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 C1QTNF12Q5T7M4 302 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 OTPQ5XKR4 325 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 GLYATQ6IB77 296 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF730Q6ZMV8 503 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 SLC16A14Q7RTX9 510 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 PIWIL3Q7Z3Z3 882 aaKnown RBP10.8□□□□□ -0.68
SMAD3-208ENST00000558827 TSEN54Q7Z6J9 526 aaKnown RBP10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF584Q8IVC4 421 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 FAM86B1Q8N7N1 296 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ICA1LQ8NDH6 482 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 NOXO1Q8NFA2 376 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 NUP37Q8NFH4 326 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 GEMIN6Q8WXD5 167 aaKnown RBP10.8□□□□□ -0.68
SMAD3-208ENST00000558827 MRPL37Q9BZE1 423 aaKnown RBP10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ARL8BQ9NVJ2 186 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 MYEF2Q9P2K5 600 aaKnown RBP10.8□□□□□ -0.68
SMAD3-208ENST00000558827 DUSP13Q9UII6 198 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ADAM21Q9UKJ8 722 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms