RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TRIB1Q96RU8 372 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 OR52A5Q9H2C5 316 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 MYOZ1Q9NP98 299 aaPredicted RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 MBNL1Q9NR56 388 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 KLK10O43240 276 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 TBX19O60806 448 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 ITGB8P26012 769 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 SLC6A12P48065 614 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 HNRNPFP52597 415 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 HNF4GQ14541 408 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 RBMS2Q15434 407 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 DOK4Q8TEW6 326 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 ITFG2Q969R8 447 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 FOXQ1Q9C009 403 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 IL21Q9HBE4 155 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 ACER3Q9NUN7 267 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 GMPR2Q9P2T1 348 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 LSM5Q9Y4Y9 91 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 A0A1W2PPK0 400 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 NUBP1P53384 320 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 FOXK2Q01167 660 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 P2RY14Q15391 338 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 LILRA6Q6PI73 481 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 TFAP2EQ6VUC0 442 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 LGI3Q8N145 548 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 OR13C2Q8NGS9 318 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 OLIG1Q8TAK6 271 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 EMG1Q92979 244 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 S1PR5Q9H228 398 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 GCM1Q9NP62 436 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 BIN3Q9NQY0 253 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 SLC39A9Q9NUM3 307 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 AK6Q9Y3D8 172 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 MYH13Q9UKX3 1938 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 ARRDC5A6NEK1 342 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 HMX3A6NHT5 357 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 ZNF728P0DKX0 622 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 EVI2BP34910 448 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 CSN1S1P47710 185 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 ZNF266Q14584 549 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 TRIP6Q15654 476 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 SMIM21Q3B7S5 101 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 PLK5Q496M5 336 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 SLC22A25Q6T423 547 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 PTRH1Q86Y79 214 aaKnown RBP10.98□□□□□ -0.65
NEK9-210ENST00000557026 OR56B4Q8NH76 319 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 TMIGD2Q96BF3 282 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 SLC35E1Q96K37 410 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 FN3KRPQ9HA64 309 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 SLC23A2Q9UGH3 650 aa10.98□□□□□ -0.65
NEK9-210ENST00000557026 TRGV5A0A0B4J1U4 118 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 GABRG2P18507 467 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 EGR3Q06889 387 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 AGBL4Q5VU57 503 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 PLXDC2Q6UX71 529 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 LINC00299Q6ZSB3 139 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ESPNLQ6ZVH7 1005 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 GDF7Q7Z4P5 450 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 GCNT2Q8N0V5 402 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 BEST4Q8NFU0 473 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 FGGYQ96C11 551 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 OR11A1Q9GZK7 315 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ESRP2Q9H6T0 727 aaKnown RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 TCRBV5S1A1TA0A578 114 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 FAM166BA8MTA8 275 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 K7ESM1 405 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ZNF195O14628 629 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 HNF1AP20823 631 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 PTNP21246 168 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ZNF93P35789 620 aaPredicted RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 TLE4Q04727 773 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 DPY19L4Q7Z388 723 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 HRASLS5Q96KN8 279 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 DCLRE1CQ96SD1 692 aaKnown RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 SAV1Q9H4B6 383 aaPredicted RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 C12orf10Q9HB07 376 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 PPIL1Q9Y3C6 166 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 SLC35F4A4IF30 521 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 PRRT4C9JH25 899 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 CRHBPP24387 322 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 RPS27AP62979 156 aaKnown RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 UBA52P62987 128 aaKnown RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 RGS7BPQ6MZT1 257 aaPredicted RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 FCRLAQ7L513 359 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 SLC36A1Q7Z2H8 476 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 MARCH3Q86UD3 253 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 LILRA2Q8N149 483 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 LRRC18Q8N456 261 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 PRR18Q8N4B5 295 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 TMEM151AQ8N4L1 468 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 OR51L1Q8NGJ5 315 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 GABRG3Q99928 467 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 TMEM246Q9BRR3 403 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 CXorf36Q9H7Y0 433 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 TERTO14746 1132 aaKnown RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 CALCBP10092 127 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 TBXA2RP21731 343 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 CHATP28329 748 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms