RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 LRR1Q96L50 414 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 ERMAPQ96PL5 475 aaPredicted RBP9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 IFT27Q9BW83 186 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 LINC00470Q9BZP3 86 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 SLCO5A1Q9H2Y9 848 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF556Q9HAH1 456 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 TBC1D23Q9NUY8 699 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 VSX1Q9NZR4 365 aaPredicted RBP9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 MALT1Q9UDY8 824 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 ITGB1BP2Q9UKP3 347 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 EMC9Q9Y3B6 208 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 UGT2A1Q9Y4X1 527 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 FBN2P35556 2912 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PTPN13Q12923 2485 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC22A23A1A5C7 686 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PRSS37A4D1T9 235 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 CENPBD1B2RD01 187 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 H3BN98 237 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 RPL36A-HNRNPH2H7BZ11 118 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 M0R129 80 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 MSTNO14793 375 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 SURF4O15260 269 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 IDH3BO43837 385 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 AGAP20933 346 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 IGHV1-2P23083 117 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 POU1F1P28069 291 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 NOS3P29474 1203 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 CCKARP32238 428 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 GRK5P34947 590 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 ACVR1BP36896 505 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 DAP3P51398 398 aaKnown RBP9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 CHN2P52757 468 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 ADARB1P78563 741 aaKnown RBP9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 IL1RL1Q01638 556 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 FMODQ06828 376 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 KRR1Q13601 381 aaKnown RBP9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 ETFDHQ16134 617 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 CARD17Q5XLA6 110 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 FBXW9Q5XUX1 488 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 GPR139Q6DWJ6 353 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC27A4Q6P1M0 643 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC25A47Q6Q0C1 308 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 MRGPRGQ86SM5 289 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 CROCCP3Q8IVE0 287 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 SYT14Q8NB59 555 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 OR2T33Q8NG76 320 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 OR4K13Q8NH42 304 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PTP4A1Q93096 173 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 MCHR2Q969V1 340 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 APH1AQ96BI3 265 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 ADAD1Q96M93 576 aaKnown RBP9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 NMNAT3Q96T66 252 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PITX2Q99697 317 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 HCAR1Q9BXC0 346 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 NMNAT2Q9BZQ4 307 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 NELFAQ9H3P2 528 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PIGMQ9H3S5 423 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 RIBC2Q9H4K1 309 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 Q9H521 79 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 GPR35Q9HC97 309 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 CMC2Q9NRP2 79 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PARPBPQ9NWS1 579 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 GALNT8Q9NY28 637 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 GLTPQ9NZD2 209 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 KIF17Q9P2E2 1029 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 NDRG4Q9ULP0 352 aaKnown RBP9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 PROCRQ9UNN8 238 aa9.4□□□□□ -0.9
NPIPB3-210ENST00000542817 A0A1B0GVG6 124 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 NKX2-6A6NCS4 301 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 H0YJX3 145 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 DVL2O14641 736 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC16A6O15403 523 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 ARHGEF9O43307 516 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 PRKYO43930 277 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 SCG5P05408 212 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 CTLA4P16410 223 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 GABRB1P18505 474 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 COX5AP20674 150 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 AQP4P55087 323 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 MYBPC1Q00872 1141 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM27E3Q08E93 113 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 C10orf128Q5T292 105 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 Q6ZT83 130 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 FOXL2NBQ6ZUU3 175 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 LUZP2Q86TE4 346 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 OR6V1Q8N148 313 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF808Q8N4W9 903 aaPredicted RBP9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 CYB561A3Q8NBI2 242 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC37A3Q8NCC5 494 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 SDR9C7Q8NEX9 313 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 NOXO1Q8NFA2 376 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 OR52L1Q8NGH7 329 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 TEX47Q8TBZ9 253 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 HRASLS5Q96KN8 279 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 RDH12Q96NR8 316 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 TSSK2Q96PF2 358 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 ALKBH3Q96Q83 286 aaPredicted RBP9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 SNX18Q96RF0 628 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 ALG12Q9BV10 488 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms