RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 C10orf128Q5T292 105 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ANKRD34AQ69YU3 496 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 C22orf34Q6ZV56 151 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ADCK1Q86TW2 530 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 OR52L1Q8NGH7 329 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 OR5K1Q8NHB7 308 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 HDAC2Q92769 488 aaKnown RBP17.05■□□□□ 0.32
DDX55-207ENST00000540763 FEVQ99581 238 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 MOV10Q9HCE1 1003 aaKnown RBP17.05■□□□□ 0.32
DDX55-207ENST00000540763 NGBQ9NPG2 151 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 SLC17A5Q9NRA2 495 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ADAM18Q9Y3Q7 739 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 MAGED1Q9Y5V3 778 aaPredicted RBP17.05■□□□□ 0.32
DDX55-207ENST00000540763 TEP1Q99973 2627 aaKnown RBP17.04■□□□□ 0.32
DDX55-207ENST00000540763 ARPC4-TTLL3A0A0A6YYG9 625 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 XKRYO14609 159 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 IDH3BO43837 385 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 ERVK-25P63136 954 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 PPA1Q15181 289 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 C9orf135Q5VTT2 229 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 HIPK1Q86Z02 1210 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 CCDC36Q8IYA8 594 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 PYDC1Q8WXC3 89 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 BCL2L2Q92843 193 aaPredicted RBP17.04■□□□□ 0.32
DDX55-207ENST00000540763 MCHR2Q969V1 340 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 NMD3Q96D46 503 aaKnown RBP17.04■□□□□ 0.32
DDX55-207ENST00000540763 SNX18Q96RF0 628 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 FOXB1Q99853 325 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 ZNF556Q9HAH1 456 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 SLC25A15Q9Y619 301 aa17.04■□□□□ 0.32
DDX55-207ENST00000540763 DHHO43323 396 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 MGRN1O60291 552 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 WNT11O96014 354 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 QDPRP09417 244 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 ARF1P84077 181 aaKnown RBP17.03■□□□□ 0.32
DDX55-207ENST00000540763 KRR1Q13601 381 aaKnown RBP17.03■□□□□ 0.32
DDX55-207ENST00000540763 TBRG1Q3YBR2 411 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 MESTQ5EB52 335 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 BEX5Q5H9J7 111 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 THEM4Q5T1C6 240 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 LRFN4Q6PJG9 635 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 KLHL24Q6TFL4 600 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 SEZ6L2Q6UXD5 910 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 SVOPLQ8N434 492 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 GTPBP3Q969Y2 492 aaKnown RBP17.03■□□□□ 0.32
DDX55-207ENST00000540763 ZNF837Q96EG3 531 aaPredicted RBP17.03■□□□□ 0.32
DDX55-207ENST00000540763 CENPNQ96H22 339 aaPredicted RBP17.03■□□□□ 0.32
DDX55-207ENST00000540763 ZC3HAV1LQ96H79 300 aaKnown RBP17.03■□□□□ 0.32
DDX55-207ENST00000540763 Q96M85 177 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 RBP7Q96R05 134 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 NIPSNAP1Q9BPW8 284 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 NELFAQ9H3P2 528 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 BAIAP2Q9UQB8 552 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 POFUT2Q9Y2G5 429 aa17.03■□□□□ 0.32
DDX55-207ENST00000540763 TEX13CA0A0J9YWL9 993 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 H3BNX3 289 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 ZNF84P51523 738 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 NR1H2P55055 460 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 TLE4Q04727 773 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 CD47Q08722 323 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 WDR31Q8NA23 367 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 LRTOMTQ8WZ04 291 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 SAMD8Q96LT4 415 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 IFT27Q9BW83 186 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 GABARAPL1Q9H0R8 117 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 EGLN3Q9H6Z9 239 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 IL20RAQ9UHF4 553 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 IER3IP1Q9Y5U9 82 aa17.02■□□□□ 0.32
DDX55-207ENST00000540763 PRSS37A4D1T9 235 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 DEFB108AA8MXU0 73 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 BHLHE40O14503 412 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 CTAG2O75638 210 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 PPP1R3DO95685 299 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 TP53P04637 393 aaPredicted RBP17.01■□□□□ 0.31
DDX55-207ENST00000540763 CDH2P19022 906 aaPredicted RBP17.01■□□□□ 0.31
DDX55-207ENST00000540763 FAHD1Q6P587 224 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 KLHL17Q6TDP4 642 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 WFDC8Q8IUA0 241 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 ZDHHC13Q8IUH4 622 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 HS3ST5Q8IZT8 346 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 SYT14Q8NB59 555 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 ERMAPQ96PL5 475 aaPredicted RBP17.01■□□□□ 0.31
DDX55-207ENST00000540763 OSBPL10Q9BXB5 764 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 RASSF1Q9NS23 344 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 TBC1D23Q9NUY8 699 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 TMEM38BQ9NVV0 291 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 VSX1Q9NZR4 365 aaPredicted RBP17.01■□□□□ 0.31
DDX55-207ENST00000540763 REV1Q9UBZ9 1251 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 PRR14LQ5THK1 2151 aa17.01■□□□□ 0.31
DDX55-207ENST00000540763 SLC22A23A1A5C7 686 aa17■□□□□ 0.31
DDX55-207ENST00000540763 G3V2T6 193 aa17■□□□□ 0.31
DDX55-207ENST00000540763 ARHGEF9O43307 516 aa17■□□□□ 0.31
DDX55-207ENST00000540763 HRGP04196 525 aa17■□□□□ 0.31
DDX55-207ENST00000540763 ZNF23P17027 643 aa17■□□□□ 0.31
DDX55-207ENST00000540763 UBE2NP61088 152 aaKnown RBP17■□□□□ 0.31
DDX55-207ENST00000540763 C3orf36Q3SXR2 165 aa17■□□□□ 0.31
DDX55-207ENST00000540763 HIKESHIQ53FT3 197 aa17■□□□□ 0.31
DDX55-207ENST00000540763 SLC25A47Q6Q0C1 308 aa17■□□□□ 0.31
DDX55-207ENST00000540763 ZNF813Q6ZN06 617 aa17■□□□□ 0.31
DDX55-207ENST00000540763 AMIGO2Q86SJ2 522 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms