RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 SLC22A24Q8N4F4 322 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 OR5K2Q8NHB8 316 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 MRPL38Q96DV4 380 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 TOE1Q96GM8 510 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 MED18Q9BUE0 208 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 EXO1Q9UQ84 846 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 MYH3P11055 1940 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 THBS1P07996 1170 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 NFYBP25208 207 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 TRHRP34981 398 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM176BQ3YBM2 270 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 GLYR1Q49A26 553 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 LYSMD4Q5XG99 296 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 CD276Q5ZPR3 534 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF296Q8WUU4 475 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ARV1Q9H2C2 271 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 TMPRSS5Q9H3S3 457 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 RNF186Q9NXI6 227 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 CSO75390 466 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 OR13C7P0DN81 318 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SPI1P17947 270 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 APEX1P27695 318 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 PSMB3P49720 205 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SNRPEP62304 92 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF836Q6ZNA1 936 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 WDR83Q9BRX9 315 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 C20orf85Q9H1P6 137 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 NGBQ9NPG2 151 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 GDE1Q9NZC3 331 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF629Q9UEG4 869 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 KPTNQ9Y664 436 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 H7C1C5 153 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 PHF1O43189 567 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 LCN6P62502 163 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SLC35A1P78382 337 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 PRDX1Q06830 199 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SMAD4Q13485 552 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SLC36A2Q495M3 483 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM88Q6PEY1 159 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 AAED1Q7RTV5 226 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SLCO5A1Q9H2Y9 848 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 C12orf10Q9HB07 376 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF355PQ9NSJ1 428 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SLAMF8Q9P0V8 285 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 DIMT1Q9UNQ2 313 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 CICQ96RK0 1608 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 LGALS8O00214 317 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 PMP2P02689 132 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 C1SP09871 688 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 BMP1P13497 986 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 EDN3P14138 238 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 OR1D4P47884 311 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 SIAH3Q8IW03 269 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 COMMD1Q8N668 190 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TNFRSF13CQ96RJ3 184 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 ELOVL1Q9BW60 279 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 ISYNA1Q9NPH2 558 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 EXOSC3Q9NQT5 275 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 OSGIN2Q9Y236 505 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 NOSIPQ9Y314 301 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TRAF3IP2O43734 574 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 RAF1P04049 648 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 HTR1FP30939 366 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 MRPL19P49406 292 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 GRB2P62993 217 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 CTBSQ01459 385 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TESK1Q15569 626 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 RPE65Q16518 533 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 KANSL1Q7Z3B3 1105 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 SLC38A5Q8WUX1 472 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 ABHD6Q9BV23 337 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TINAGL1Q9GZM7 467 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 LRIT1Q9P2V4 623 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TRAV36DV7A0A075B6V5 113 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 SERINC4A6NH21 518 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 METTL15P1P0C7V9 234 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 PTAFRP25105 342 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 UBE2G2P60604 165 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 MFAP5Q13361 173 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 VHLLQ6RSH7 139 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 SYT9Q86SS6 491 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 MAML2Q8IZL2 1156 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 GOT1L1Q8NHS2 421 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM106AQ96A25 262 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 WWTR1Q9GZV5 400 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 NECAP2Q9NVZ3 263 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 HCFC1R1Q9NWW0 138 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TAAR2Q9P1P5 351 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 H0YGG7 62 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 PMS2P2O95744 297 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 ICAM2P13598 275 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 CCR6P51684 374 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 ALKBH1Q13686 389 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 OR6M1Q8NGM8 313 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 INTS12Q96CB8 462 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 IL17BQ9UHF5 180 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 PRAMEF4O60810 478 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 PAPLNO95428 1278 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms