RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ALG12Q9BV10 488 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 ULBP2Q9BZM5 246 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 VCXQ9H320 206 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 MED20Q9H944 212 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 B3GAT2Q9NPZ5 323 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 KLHL21Q9UJP4 597 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 FOXD3Q9UJU5 478 aaPredicted RBP12.1□□□□□ -0.47
CD44-224ENST00000526669 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 CADP27708 2225 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 SLC22A23A1A5C7 686 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 PRSS37A4D1T9 235 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 FAM183AA6NL82 134 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 RIIAD1A6NNX1 92 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 MSTNO14793 375 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 IDH3BO43837 385 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 LYZL6O75951 148 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 RENP00797 406 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 QDPRP09417 244 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 ASCL1P50553 236 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 ROR2Q01974 943 aaKnown RBP12.09□□□□□ -0.47
CD44-224ENST00000526669 CRMP1Q14194 572 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 SNAPC1Q16533 368 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 CEACAM16Q2WEN9 425 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 SLC25A35Q3KQZ1 300 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 C12orf73Q69YU5 71 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 CXorf67Q86X51 503 aaPredicted RBP12.09□□□□□ -0.47
CD44-224ENST00000526669 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 OR9Q1Q8NGQ5 310 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 LILRB4Q8NHJ6 448 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 FAM81AQ8TBF8 368 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 HTRA1Q92743 480 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 MCHR2Q969V1 340 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 PLEKHA8Q96JA3 519 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 TSSK2Q96PF2 358 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 RBM24Q9BX46 236 aaKnown RBP12.09□□□□□ -0.47
CD44-224ENST00000526669 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
CD44-224ENST00000526669 LINC00470Q9BZP3 86 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 GRIP2Q9C0E4 1043 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 SYT4Q9H2B2 425 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 RPRD1BQ9NQG5 326 aaKnown RBP12.09□□□□□ -0.47
CD44-224ENST00000526669 C8orf4Q9NR00 106 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 CMC2Q9NRP2 79 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 GPR52Q9Y2T5 361 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 GMPPBQ9Y5P6 360 aa12.09□□□□□ -0.47
CD44-224ENST00000526669 GCN1Q92616 2671 aaKnown RBP12.09□□□□□ -0.47
CD44-224ENST00000526669 OR6C68A6NDL8 312 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 FAM171A2A8MVW0 826 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 A8MXE2 369 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 SURF4O15260 269 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 PRKYO43930 277 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 CLDN14O95500 239 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 CLIC3O95833 236 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 GPANK1O95872 356 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 IFNGP01579 166 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 HMGN1P05114 100 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ITGA5P08648 1049 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 CTLA4P16410 223 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ZNF3P17036 446 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 IGHV1-2P23083 117 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 GRNP28799 593 aaKnown RBP12.08□□□□□ -0.48
CD44-224ENST00000526669 VHLP40337 213 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ITGADQ13349 1161 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ETFDHQ16134 617 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 SNCBQ16143 134 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 OTPQ5XKR4 325 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 LRFN4Q6PJG9 635 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 SLC25A47Q6Q0C1 308 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 BEND4Q6ZU67 534 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ADCK1Q86TW2 530 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 TCEANCQ8N8B7 351 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 NPEPL1Q8NDH3 523 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ZNF555Q8NEP9 628 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 LRR1Q96L50 414 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 RBP7Q96R05 134 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 TEX12Q9BXU0 123 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 CRLF2Q9HC73 371 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 SRA1Q9HD15 236 aaKnown RBP12.08□□□□□ -0.48
CD44-224ENST00000526669 KCNJ16Q9NPI9 418 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 FAM118AQ9NWS6 357 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 ASB6Q9NWX5 421 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 GALNT8Q9NY28 637 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 VSX1Q9NZR4 365 aaPredicted RBP12.08□□□□□ -0.48
CD44-224ENST00000526669 JKAMPQ9P055 326 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 MALT1Q9UDY8 824 aa12.08□□□□□ -0.48
CD44-224ENST00000526669 LOC100130705A0A1B0GUX0 176 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 A0A1W2PPL8 197 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 DCTN6O00399 190 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 DHHO43323 396 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 SLC16A7O60669 478 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 RAD51DO75771 328 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 GYPBP06028 91 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 CLUP10909 449 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 CDAP32320 146 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms