RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ASPNQ9BXN1 380 aa17.2■□□□□ 0.34
SQSTM1-215ENST00000514093 TPT1P8Q9HAU6 139 aa17.2■□□□□ 0.34
SQSTM1-215ENST00000514093 AIG1Q9NVV5 245 aa17.2■□□□□ 0.34
SQSTM1-215ENST00000514093 RAP2CQ9Y3L5 183 aa17.2■□□□□ 0.34
SQSTM1-215ENST00000514093 C11orf98E9PRG8 122 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 FOXH1O75593 365 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 IGHV1-46P01743 117 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 ZNF154Q13106 437 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 SPRNQ5BIV9 151 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 LSMEM1Q8N8F7 131 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 SCAIQ8N9R8 606 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 TMEM54Q969K7 222 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 VPS33AQ96AX1 596 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 TMIGD2Q96BF3 282 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 SORT1Q99523 831 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 GLTPQ9NZD2 209 aa17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 PDP1Q9P0J1 537 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-215ENST00000514093 PPIAL4EA0A075B759 164 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 IGHV3OR16-10A0A075B7F0 116 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PPIAL4CA0A0B4J2A2 164 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PPIAL4DF5H284 164 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PLPP3O14495 311 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 UBOX5O94941 541 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 ANP32DO95626 131 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 GPANK1O95872 356 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 MT-ND5P03915 603 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 SERPINE1P05121 402 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PPIAL4FP0DN26 164 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 LRRC74AQ0VAA2 488 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 TBC1D28Q2M2D7 210 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 TMEM255AQ5JRV8 349 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 SPATA46Q5T0L3 261 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 LRFN4Q6PJG9 635 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PXKQ7Z7A4 578 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 SYT14Q8NB59 555 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 OR1J1Q8NGS3 322 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 DNAJA4Q8WW22 397 aaPredicted RBP17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 DCLRE1CQ96SD1 692 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PKP2Q99959 881 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 MS4A7Q9GZW8 240 aaPredicted RBP17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 NPHS2Q9NP85 383 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 PNPOQ9NVS9 261 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 TMEM38BQ9NVV0 291 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 DCAF16Q9NXF7 216 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 MRPL39Q9NYK5 338 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 GPR45Q9Y5Y3 372 aa17.18■□□□□ 0.34
SQSTM1-215ENST00000514093 TMEM247A6NEH6 219 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 TYROBPO43914 113 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 IGHV3-13P01766 116 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 SBK2P0C263 348 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 CCNOP22674 350 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 GCH1P30793 250 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 SEC61A1P61619 476 aaKnown RBP17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 MOGQ16653 247 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 HIST2H2BDQ6DRA6 164 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 OGFOD2Q6N063 350 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 TMEM53Q6P2H8 277 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 ULK3Q6PHR2 472 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 SPATC1Q76KD6 591 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 OR4K5Q8NGD3 323 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 SLC35B4Q969S0 331 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 ZBTB18Q99592 522 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 BCL2L14Q9BZR8 327 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 MEAF6Q9HAF1 191 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 TCF7L2Q9NQB0 619 aa17.17■□□□□ 0.34
SQSTM1-215ENST00000514093 CLDN34H7C241 214 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 SNAP29O95721 258 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 ADORA3P0DMS8 318 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 MPV17P39210 176 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 SLC1A6P48664 564 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 OCLNQ16625 522 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 PDCD4Q53EL6 469 aaKnown RBP17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 FAM209AQ5JX71 171 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 KIR3DL3Q8N743 410 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 BHLHE22Q8NFJ8 381 aaPredicted RBP17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 OR6S1Q8NH40 331 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 GEMIN6Q8WXD5 167 aaKnown RBP17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 SLC47A1Q96FL8 570 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 EPYCQ99645 322 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 BCL2L10Q9HD36 194 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 EGFL7Q9UHF1 273 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 LGALS13Q9UHV8 139 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 INSIG2Q9Y5U4 225 aa17.16■□□□□ 0.34
SQSTM1-215ENST00000514093 ZSCAN5BA6NJL1 495 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 TPST1O60507 370 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 FARS2O95363 451 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 IGHMP01871 453 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 IGHV4-38-2P0DP08 117 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 ZNF12P17014 697 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 MMP15P51511 669 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 SLC3A1Q07837 685 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 MELKQ14680 651 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 THEM4Q5T1C6 240 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 SLC16A14Q7RTX9 510 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 OR1J2Q8NGS2 313 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 IPCEF1Q8WWN9 437 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 CCT8L2Q96SF2 557 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 MRI1Q9BV20 369 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms