RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 FAM109AQ8N4B1 249 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 OR51A2Q8NGJ7 313 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 HAVCR2Q8TDQ0 301 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 SFXN2Q96NB2 322 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
GPC1-209ENST00000495100 RTN4RQ9BZR6 473 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 MS4A7Q9GZW8 240 aaPredicted RBP12.22□□□□□ -0.45
GPC1-209ENST00000495100 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 SEMA6CQ9H3T2 930 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
GPC1-209ENST00000495100 EXOGQ9Y2C4 368 aaKnown RBP12.22□□□□□ -0.45
GPC1-209ENST00000495100 PIN1P1O15428 100 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 PLPP2O43688 288 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 OR7A10O76100 309 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 ZNF205O95201 554 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 PGAM2P15259 253 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 AP3S2P59780 193 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 SGCAQ16586 387 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 GALNT11Q8NCW6 608 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 PGLYRP3Q96LB9 341 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 DZANK1Q9NVP4 752 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 OR5V1Q9UGF6 321 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 ZNF223Q9UK11 482 aaPredicted RBP12.21□□□□□ -0.45
GPC1-209ENST00000495100 ENTPD2Q9Y5L3 495 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 IFNA7P01567 189 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 ELOCQ15369 112 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 NPEPL1Q8NDH3 523 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 GPR148Q8TDV2 347 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 GON7Q9BXV9 100 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 NARFLQ9H6Q4 476 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 RANBP3Q9H6Z4 567 aaPredicted RBP12.21□□□□□ -0.45
GPC1-209ENST00000495100 TAS2R4Q9NYW5 299 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 UBQLN2Q9UHD9 624 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 PCNX1Q96RV3 2341 aa12.21□□□□□ -0.45
GPC1-209ENST00000495100 TCRBV16S1A1N1A0A5B0 115 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 ZNF749O43361 778 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 FOXS1O43638 330 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 LMX1BO60663 402 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 PPM1BO75688 479 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 DCNP07585 359 aaKnown RBP12.21□□□□□ -0.46
GPC1-209ENST00000495100 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.46
GPC1-209ENST00000495100 CDAP32320 146 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 TAS2R20P59543 309 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.46
GPC1-209ENST00000495100 TMEM225Q6GV28 225 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 OR52W1Q6IF63 320 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 NUP54Q7Z3B4 507 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 NR4A3Q92570 626 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 ELSPBP1Q96BH3 223 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 MED18Q9BUE0 208 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 COMMD9Q9P000 198 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 MAB21L2Q9Y586 359 aa12.21□□□□□ -0.46
GPC1-209ENST00000495100 SPTY2D1-AS1A0A0U1RR47 76 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 TMEM269A0A1B0GVZ9 245 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 AGPAT2O15120 278 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 SUSD5O60279 629 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 GDF9O60383 454 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 S1PR1P21453 382 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 ENPP1P22413 925 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 CD38P28907 300 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 PRSS3P35030 304 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 GUCA1AP43080 201 aaPredicted RBP12.2□□□□□ -0.46
GPC1-209ENST00000495100 Q499Y3 187 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 WBP2NLQ6ICG8 309 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 NUDCD2Q8WVJ2 157 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 CPNE2Q96FN4 548 aaPredicted RBP12.2□□□□□ -0.46
GPC1-209ENST00000495100 BANF2Q9H503 90 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 METTL7AQ9H8H3 244 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 PLEKHA1Q9HB21 404 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 FRRS1LQ9P0K9 344 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 EPHA6Q9UF33 1036 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 KIR2DS5A0A0G2JLQ3 304 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 A0A0G2JNG1 304 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 F5H5K5 113 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 KIR2DS3K7RE56 304 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 NKX2-2O95096 273 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 HCKP08631 526 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 H2BFMP0C1H6 154 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 TNFRSF4P43489 277 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 FOXK1P85037 733 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 TLE3Q04726 772 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 KIR2DS5Q14953 304 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 DMKNQ6E0U4 476 aaPredicted RBP12.2□□□□□ -0.46
GPC1-209ENST00000495100 SLC2A12Q8TD20 617 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 ARL5BQ96KC2 179 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 NUDT9Q9BW91 350 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 FGF21Q9NSA1 209 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 RAB3DO95716 219 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 IFNGR1P15260 489 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 PRPS1P60891 318 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 OPCMLQ14982 345 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 PRTGQ2VWP7 1150 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 FAM199XQ6PEV8 388 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms