RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	DHH	O43323	396 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	SMPD2	O60906	423 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	IGHM	P01871	453 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	PATE4	P0C8F1	98 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	ACVR1B	P36896	505 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	RPL27	P61353	136 aa	Known RBP	13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	PIGF	Q07326	219 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	PGGHG	Q32M88	737 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	TMPRSS11F	Q6ZWK6	438 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	HDDC2	Q7Z4H3	204 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	FANK1	Q8TC84	345 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	SMAP2	Q8WU79	429 aa	Predicted RBP	13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	TMEM171	Q8WVE6	324 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	NSMAF	Q92636	917 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	MCHR2	Q969V1	340 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	BOD1	Q96IK1	185 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	LRGUK	Q96M69	825 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	CXXC4	Q9H2H0	198 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	TMEM38B	Q9NVV0	291 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	BEX4	Q9NWD9	120 aa	Predicted RBP	13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	VNN3	Q9NY84	501 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	CISD1	Q9NZ45	108 aa	Known RBP	13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	ZNF224	Q9NZL3	707 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	MGAT4B	Q9UQ53	548 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	ATP23	Q9Y6H3	246 aa		13.22	□□□□□ -0.29
SNU13-205	ENST00000463675	ACAN	P16112	2415 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	HTR3E	A5X5Y0	456 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	UNC119B	A6NIH7	251 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	OR10H3	O60404	316 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	CALCR	P30988	508 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	PPP1R8	Q12972	351 aa	Known RBP	13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	ZBED5	Q49AG3	693 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	THSD4	Q6ZMP0	1018 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	KRTAP1-3	Q8IUG1	177 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	WFDC11	Q8NEX6	87 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	OR9Q2	Q8NGE9	314 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	FGFBP3	Q8TAT2	258 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	ZNF519	Q8TB69	540 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	PIGT	Q969N2	578 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	RASD2	Q96D21	266 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	MS4A3	Q96HJ5	214 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675		Q96M85	177 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	SH3GL3	Q99963	347 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	KCNS3	Q9BQ31	491 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	MRPL13	Q9BYD1	178 aa	Known RBP	13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	ZNF346	Q9UL40	294 aa	Known RBP	13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	SIGLEC7	Q9Y286	467 aa		13.21	□□□□□ -0.29
SNU13-205	ENST00000463675	MED13L	Q71F56	2210 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	TEX13C	A0A0J9YWL9	993 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	NPIPB13	A6NJU9	1138 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	NPIPB4	C9JG80	1138 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	ACOT8	O14734	319 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	STAMBP	O95630	424 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	IGKV3-15	P01624	115 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	IGLV1-44	P01699	117 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	DANCR	P0C864	163 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	CDA	P32320	146 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	CDKN1A	P38936	164 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	MAGEA2	P43356	314 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	GIPR	P48546	466 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	PTDSS1	P48651	473 aa	Known RBP	13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	SMIM11A	P58511	58 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	FXYD6P3	P58550	94 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	NAAA	Q02083	359 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	HIST3H3	Q16695	136 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	GSG1	Q2KHT4	349 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	MEST	Q5EB52	335 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675		Q5PR19	223 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	VHLL	Q6RSH7	139 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	ZER1	Q7Z7L7	766 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	SKA3	Q8IX90	412 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	SLC22A24	Q8N4F4	322 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	IGFBPL1	Q8WX77	278 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	NANOS1	Q8WY41	292 aa	Known RBP	13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	NMD3	Q96D46	503 aa	Known RBP	13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	ZNF570	Q96NI8	536 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	KCNK17	Q96T54	332 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	BTBD10	Q9BSF8	475 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	TRIM15	Q9C019	465 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	MAGIX	Q9H6Y5	334 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	STX18	Q9P2W9	335 aa	Known RBP	13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	CRNN	Q9UBG3	495 aa	Predicted RBP	13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	TMCC3	Q9ULS5	477 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	LYVE1	Q9Y5Y7	322 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675		U3KQV3	271 aa		13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.2	□□□□□ -0.3
SNU13-205	ENST00000463675	TNFRSF11B	O00300	401 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	ARHGEF9	O43307	516 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	DNAJC8	O75937	253 aa	Predicted RBP	13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	NDUFB2	O95178	105 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	PPP1R3D	O95685	299 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	CD14	P08571	375 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	CBR1	P16152	277 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	PTH2R	P49190	550 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	ZNF84	P51523	738 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	CHRNB3	Q05901	458 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	BNIP1	Q12981	228 aa		13.19	□□□□□ -0.3
SNU13-205	ENST00000463675	KRR1	Q13601	381 aa	Known RBP	13.19	□□□□□ -0.3

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