RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TRAM1Q15629 374 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ACKR1Q16570 336 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZNF239Q16600 458 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 TMEM176BQ3YBM2 270 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ARMCX4Q5H9R4 360 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 PDSS1Q5T2R2 415 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 PRAMEF20Q5VT98 475 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 C1QL3Q5VWW1 255 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 RAET1LQ5VY80 246 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 B3GNTL1Q67FW5 361 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 LEG1Q6P5S2 330 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 TUBA3EQ6PEY2 450 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 DNM1P34Q6PK57 102 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 PLEKHG7Q6ZR37 379 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 TMPPEQ6ZT21 453 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FAM122BQ7Z309 247 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 MDGA2Q7Z553 956 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 BCDIN3DQ7Z5W3 292 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 KCTD20Q7Z5Y7 419 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 LHFPL3Q86UP9 236 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 AMER2Q8N7J2 671 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 LRRC75AQ8NAA5 344 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 CYB561A3Q8NBI2 242 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 LSM14AQ8ND56 463 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 NPEPL1Q8NDH3 523 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ATP6V1C2Q8NEY4 427 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 BBS1Q8NFJ9 593 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR4F15Q8NGB8 312 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR2T27Q8NH04 317 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR14L1PQ8NHC6 308 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 POC1BQ8TC44 478 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FNDC8Q8TC99 324 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 MIB2Q96AX9 1013 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 C12orf43Q96C57 262 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZHX1-C8orf76Q96EF9 292 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 Q96M85 177 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 CCDC140Q96MF4 163 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 JSRP1Q96MG2 331 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 C5orf34Q96MH7 638 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 GNRHR2Q96P88 292 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 TSPAN32Q96QS1 320 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 RBP7Q96R05 134 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR5B2Q96R09 309 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 NMNAT3Q96T66 252 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 DDOQ99489 341 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 COQ7Q99807 217 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 KLHDC3Q9BQ90 382 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ALG12Q9BV10 488 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR2B2Q9GZK3 357 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR11A1Q9GZK7 315 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR51V1Q9H2C8 321 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 MED20Q9H944 212 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 SIAEQ9HAT2 523 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 PROK2Q9HC23 129 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FANCFQ9NPI8 374 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 TIGARQ9NQ88 270 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 KLHL1Q9NR64 748 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 QPCTLQ9NXS2 382 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 DLL3Q9NYJ7 618 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 VSX1Q9NZR4 365 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FBLN5Q9UBX5 448 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FBXL7Q9UJT9 491 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FBXL2Q9UKC9 423 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZNF346Q9UL40 294 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 NPIPA1Q9UND3 350 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 POLHQ9Y253 713 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 RASD1Q9Y272 281 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 RPH3AQ9Y2J0 694 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 KLF13Q9Y2Y9 288 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 LSM2Q9Y333 95 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 CAB39Q9Y376 341 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 ADAM18Q9Y3Q7 739 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 MRPS18BQ9Y676 258 aaKnown RBP3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 FKBP7Q9Y680 259 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 TMEM14AQ9Y6G1 99 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 SPEGQ15772 3267 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 KIAA1549Q9HCM3 1950 aa3.56□□□□□ -1.84
HMGB1P37-201ENST00000439613 A0A1W2PNV4 684 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 SLC22A23A1A5C7 686 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR2M5A3KFT3 312 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR5H15A6NDH6 313 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 CCDC182A6NF36 153 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 TRABD2BA6NFA1 517 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 ARGFXA6NJG6 315 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 AQP7P3A6NL99 342 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 C17orf51A8MQB3 221 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 C12orf71A8MTZ7 269 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 B4DXG7 233 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 C11orf98E9PRG8 122 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 MS4A18H0YCH9 400 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 H3BML4 177 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 PHYHO14832 338 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 ARHGEF9O43307 516 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 NME2P1O60361 137 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 NEURL1O76050 574 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 GABARAPO95166 117 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 WDPCPO95876 746 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 HLA-DPB1P04440 258 aa3.55□□□□□ -1.84
HMGB1P37-201ENST00000439613 HPNP05981 417 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms