RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RPL18Q07020 188 aaKnown RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 C6orf52Q5T4I8 152 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 TMEM53Q6P2H8 277 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 SLC16A14Q7RTX9 510 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 MICU2Q8IYU8 434 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 CDK20Q8IZL9 346 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 LRRC18Q8N456 261 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ARIH2OSQ8N7S6 290 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ZNF540Q8NDQ6 660 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 OR4K5Q8NGD3 323 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 MOSPD2Q8NHP6 518 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 MCHR2Q969V1 340 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ZNF347Q96SE7 839 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 SYT3Q9BQG1 590 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 MRPL37Q9BZE1 423 aaKnown RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 PCDHAC1Q9H158 963 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 OR51B6Q9H340 312 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 DENND2DQ9H6A0 471 aaPredicted RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 INIPQ9NRY2 104 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 C20orf141Q9NUB4 165 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 RHCGQ9UBD6 479 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 REV1Q9UBZ9 1251 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 FBXO9Q9UK97 447 aaPredicted RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 ARID1AO14497 2285 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 IGHV4-61A0A0C4DH41 118 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 FAM220BPB1ANY3 271 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 VWC2LB2RUY7 222 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 LMX1BO60663 402 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 CCDC22O60826 627 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ENTPD5O75356 428 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 TRMUO75648 421 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF682O95780 498 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 TGFAP01135 160 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 SERPINA5P05154 406 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 PGA4P0DJD7 388 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 PGA3P0DJD8 388 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 COX4I1P13073 169 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 IFI30P13284 250 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ACADSP16219 412 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF16P17020 682 aaPredicted RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 GLRXP35754 106 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 MDH1P40925 334 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 SEC24CP53992 1094 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 SELENOWP63302 87 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 PLP2Q04941 152 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 LIPEQ05469 1076 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ST3GAL3Q11203 375 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 MAD2L1BPQ15013 274 aaPredicted RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 SGCAQ16586 387 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ALKBH6Q3KRA9 238 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 PODNL1Q6PEZ8 512 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 FKBP9P1Q75LS8 142 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF627Q7L945 461 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 LRP11Q86VZ4 500 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 MEX3DQ86XN8 651 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF454Q8N9F8 522 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ICA1LQ8NDH6 482 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 RP9Q8TA86 221 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 UBASH3BQ8TF42 649 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 LZICQ8WZA0 190 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 NSMAFQ92636 917 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 MRPL24Q96A35 216 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF75AQ96N20 296 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF426Q9BUY5 554 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 FNDC11Q9BVV2 318 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 POLR2J2Q9GZM3 115 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 SHARPINQ9H0F6 387 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 POLR2J3Q9H1A7 115 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 KCNN2Q9H2S1 579 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 CHODLQ9H9P2 273 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 CDH20Q9HBT6 801 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 MYOZ1Q9NP98 299 aaPredicted RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 CMTM6Q9NX76 183 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF224Q9NZL3 707 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 FBXL3Q9UKT7 428 aa8.01□□□□□ -1.13
NUP50-206ENST00000422489 ZNF346Q9UL40 294 aaKnown RBP8.01□□□□□ -1.13
NUP50-206ENST00000422489 IQCMA0A1B0GVH7 501 aa8□□□□□ -1.13
NUP50-206ENST00000422489 A0A1W2PPW3 197 aa8□□□□□ -1.13
NUP50-206ENST00000422489 LRP5LA4QPB2 252 aa8□□□□□ -1.13
NUP50-206ENST00000422489 CXCR6O00574 342 aa8□□□□□ -1.13
NUP50-206ENST00000422489 SYNGR3O43761 229 aa8□□□□□ -1.13
NUP50-206ENST00000422489 PIP5K1CO60331 668 aa8□□□□□ -1.13
NUP50-206ENST00000422489 IFNW1P05000 195 aa8□□□□□ -1.13
NUP50-206ENST00000422489 LCKP06239 509 aa8□□□□□ -1.13
NUP50-206ENST00000422489 FAM157BP0CG42 384 aa8□□□□□ -1.13
NUP50-206ENST00000422489 SAGP10523 405 aaPredicted RBP8□□□□□ -1.13
NUP50-206ENST00000422489 THRBP10828 461 aa8□□□□□ -1.13
NUP50-206ENST00000422489 CCNOP22674 350 aa8□□□□□ -1.13
NUP50-206ENST00000422489 CDAP32320 146 aa8□□□□□ -1.13
NUP50-206ENST00000422489 ALDH3B1P43353 468 aa8□□□□□ -1.13
NUP50-206ENST00000422489 DAP3P51398 398 aaKnown RBP8□□□□□ -1.13
NUP50-206ENST00000422489 SELENOVP59797 346 aa8□□□□□ -1.13
NUP50-206ENST00000422489 RPS23P62266 143 aaKnown RBP8□□□□□ -1.13
NUP50-206ENST00000422489 TOP3AQ13472 1001 aaPredicted RBP8□□□□□ -1.13
NUP50-206ENST00000422489 MSMPQ1L6U9 139 aa8□□□□□ -1.13
NUP50-206ENST00000422489 SLC36A2Q495M3 483 aa8□□□□□ -1.13
NUP50-206ENST00000422489 IL17RELQ6ZVW7 336 aa8□□□□□ -1.13
NUP50-206ENST00000422489 IGFN1Q86VF2 1251 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms