RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NPPAP01160 153 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 PLEKP08567 350 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CT62P0C5K7 136 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 IGFBP3P17936 291 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 IMPDH1P20839 514 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CXCL5P42830 114 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 MAGEA1P43355 309 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 QARSP47897 775 aaKnown RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 TFPI2P48307 235 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 ARRB1P49407 418 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 ZNF136P52737 540 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CRYBB1P53674 252 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 ATP1B3P54709 279 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CDH4P55283 916 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 NCBP1Q09161 790 aaKnown RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 MAB21L1Q13394 359 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 SSX2Q16385 188 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 SFT2D3Q587I9 215 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 XKR7Q5GH72 579 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 C6orf226Q5I0X4 101 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 TMEM255AQ5JRV8 349 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 SPANXN2Q5MJ10 180 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 RNASEKQ6P5S7 137 aaKnown RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 BZW1Q7L1Q6 419 aaKnown RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CAMK2N1Q7Z7J9 78 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 SLC35F2Q8IXU6 374 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CYB561D1Q8N8Q1 229 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 MFSD9Q8NBP5 474 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 FAM83FQ8NEG4 500 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 SPATA4Q8NEY3 305 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 OR2L3Q8NG85 312 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 OR4F15Q8NGB8 312 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 C10orf35Q96D05 121 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 RNF2Q99496 336 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CHP1Q99653 195 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 TRIM62Q9BVG3 475 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 RSPO3Q9BXY4 272 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 DNTTIP1Q9H147 329 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 NEUROG2Q9H2A3 272 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 CLMPQ9H6B4 373 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 GEMIN7Q9H840 131 aaKnown RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 LHX9Q9NQ69 397 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 POLE4Q9NR33 117 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 GCNT4Q9P109 453 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 RPL36Q9Y3U8 105 aaKnown RBP2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 HEBP2Q9Y5Z4 205 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 PLEKHG2Q9H7P9 1386 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 NINLQ9Y2I6 1382 aa2.44□□□□□ -2.02
HMGB1P49-201ENST00000418882 KIF27Q86VH2 1401 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 NUP214P35658 2090 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 GABRR3A8MPY1 467 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 LOC110117498-PIK3R3F6TDL0 507 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 SPECC1L-ADORA2AF8WAN1 911 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 SPOPO43791 374 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 AIREO43918 545 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 KRT14P02533 472 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 S100A9P06702 114 aaKnown RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 KLK3P07288 261 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 CRYGCP07315 174 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 TPM1P09493 284 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 DBTP11182 482 aaKnown RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ATP1B2P14415 290 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ACVR1Q04771 509 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 STK11Q15831 433 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 LY6EQ16553 131 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 MICBQ29980 383 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 SAMD4BQ5PRF9 694 aaKnown RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 C1orf220Q5T0J3 134 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 BEND3Q5T5X7 828 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 TTC19Q6DKK2 380 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 CCDC80Q76M96 950 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ZNF546Q86UE3 836 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 Q8N976 141 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 OR1L6Q8NGR2 347 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ZNF721Q8TF20 911 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ELMO1Q92556 727 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 NRGNQ92686 78 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ASB9Q96DX5 294 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 TAAR1Q96RJ0 339 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 SIKE1Q9BRV8 207 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 PARD6BQ9BYG5 372 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 MRPL37Q9BZE1 423 aaKnown RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 SLC7A5P2Q9GIP4 190 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 XKR8Q9H6D3 395 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 AUNIPQ9H7T9 357 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ZNF160Q9HCG1 818 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 THUMPD1Q9NXG2 353 aaKnown RBP2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 PTTG3PQ9NZH4 202 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 VANGL2Q9ULK5 521 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 TBC1D24Q9ULP9 559 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 RHBDD3Q9Y3P4 386 aa2.43□□□□□ -2.02
HMGB1P49-201ENST00000418882 ATP10AO60312 1499 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 IGLV4-60A0A075B6I1 120 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 TRAV25A0A0B4J276 109 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 F5H6K3 240 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 EIF3HO15372 352 aaKnown RBP eCLIP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 RRP8O43159 456 aaKnown RBP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 MED6O75586 246 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 CSTAP01040 98 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 PNMA6AP0CW24 399 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 1701.8 ms