RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 USE1Q9NZ43 259 aa16.31■□□□□ 0.2
SEMA3B-202ENST00000418576 GPR52Q9Y2T5 361 aa16.31■□□□□ 0.2
SEMA3B-202ENST00000418576 FASNP49327 2511 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 SOCS2O14508 198 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 ALPLP05186 524 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 CDH2P19022 906 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 PSMB1P20618 241 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 IGHV1-2P23083 117 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 UGT2B10P36537 528 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 GIPRP48546 466 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 CRISP1P54107 249 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 HIST3H3Q16695 136 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 MESTQ5EB52 335 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 THEM4Q5T1C6 240 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 STAC2Q6ZMT1 411 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 WDFY1Q8IWB7 410 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 RASD2Q96D21 266 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 GPR35Q9HC97 309 aa16.3■□□□□ 0.2
SEMA3B-202ENST00000418576 SPTBN1Q01082 2364 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 CIB4A0PJX0 185 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 MAGEA13PA6NCF6 341 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 PRSS44E7EML9 344 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 MITFO75030 526 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 LYZL6O75951 148 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 QDPRP09417 244 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 COX5AP20674 150 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 IL32P24001 234 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 RAD23AP54725 363 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 SORDQ00796 357 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 OR7E24Q6IFN5 339 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 MCHR2Q969V1 340 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 USB1Q9BQ65 265 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 C8orf4Q9NR00 106 aa16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 TMEFF2Q9UIK5 374 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-202ENST00000418576 PRSS37A4D1T9 235 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 H0YJX3 145 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 HIST1H1CP16403 213 aaKnown RBP16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 SH3BGRP55822 239 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 GINS1Q14691 196 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 CEACAM16Q2WEN9 425 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 PHYHD1Q5SRE7 291 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 SLC35F1Q5T1Q4 408 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 C9orf135Q5VTT2 229 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 ZNF433Q8N7K0 673 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 STEAP2Q8NFT2 490 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 OR4K13Q8NH42 304 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 FREM1Q5H8C1 2179 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 ALPK2Q86TB3 2170 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 A1L4Q6 167 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 RENP00797 406 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 IFNGP01579 166 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 LYNP07948 512 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 ITGA5P08648 1049 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 CALRP27797 417 aaKnown RBP16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 STK11Q15831 433 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 PGGHGQ32M88 737 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 LRFN4Q6PJG9 635 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 LINGO2Q7L985 606 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 BHLHA15Q7RTS1 189 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 OR52E2Q8NGJ4 325 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 OR4Q3Q8NH05 313 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 OR10A4Q9H209 315 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 NPDC1Q9NQX5 325 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 RAB26Q9ULW5 256 aa16.28■□□□□ 0.2
SEMA3B-202ENST00000418576 TENM4Q6N022 2769 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 LRRK2Q5S007 2527 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 SLC22A23A1A5C7 686 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 ZNF99A8MXY4 864 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 DHHO43323 396 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 DENRO43583 198 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 RAD51DO75771 328 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 HMGN1P05114 100 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 GRNP28799 593 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 HSPA13P48723 471 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 ZNF84P51523 738 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 CDK5Q00535 292 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 NPRL3Q12980 569 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 MED21Q13503 144 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 PTGES3Q15185 160 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 LEG1Q6P5S2 330 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 TMEM154Q6P9G4 183 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 IQCF1Q8N6M8 205 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 C1orf162Q8NEQ5 155 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 SNX18Q96RF0 628 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 NMNAT3Q96T66 252 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 SLC29A1Q99808 456 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 PRRG3Q9BZD7 231 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 VSX1Q9NZR4 365 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 NDRG3Q9UGV2 375 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 KLHL21Q9UJP4 597 aa16.27■□□□□ 0.2
SEMA3B-202ENST00000418576 CACNA1CQ13936 2221 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 GCN1Q92616 2671 aaKnown RBP16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 RIIAD1A6NNX1 92 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 H7C1C5 153 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 CLDN1O95832 211 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 PPP3CBP16298 524 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 HOXC12P31275 282 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 GRK5P34947 590 aa16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 CDKN2AP42771 156 aaKnown RBP16.26■□□□□ 0.19
SEMA3B-202ENST00000418576 FOXG1P55316 489 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms