RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR4K5Q8NGD3 323 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR52L1Q8NGH7 329 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF563Q8TA94 476 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC22A8Q8TCC7 542 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GRHL3Q8TE85 626 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF721Q8TF20 911 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PTPMT1Q8WUK0 201 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ACOT11Q8WXI4 607 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 HDAC2Q92769 488 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 OMA1Q96E52 524 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC41A3Q96GZ6 507 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SENP5Q96HI0 755 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 LRFN5Q96NI6 719 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 MUS81Q96NY9 551 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PITX2Q99697 317 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NIPSNAP1Q9BPW8 284 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 DDA1Q9BW61 102 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TBL1XR1Q9BZK7 514 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCDC90BQ9GZT6 254 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 WWTR1Q9GZV5 400 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NXF5Q9H1B4 397 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF696Q9H7X3 374 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 WDR54Q9H977 334 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCNB1IP1Q9NPC3 277 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 FBXO8Q9NRD0 319 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 UBQLN4Q9NRR5 601 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ACER3Q9NUN7 267 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 UBAP1Q9NZ09 502 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ACAD8Q9UKU7 415 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC7A7Q9UM01 511 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 A4GNTQ9UNA3 340 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM5Q9Y2B1 443 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TPRKBQ9Y3C4 175 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 MED31Q9Y3C7 131 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PTRH2Q9Y3E5 179 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PCDHGA1Q9Y5H4 931 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLDN16Q9Y5I7 305 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 HSPE1-MOB4S4R3N1 261 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 UNC13CQ8NB66 2214 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CPAMD8Q8IZJ3 1885 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NINQ8N4C6 2090 aa3.4□□□□□ -1.86
HMGB3P20-201ENST00000417997 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.86
HMGB3P20-201ENST00000417997 EYSQ5T1H1 3165 aa3.4□□□□□ -1.86
HMGB3P20-201ENST00000417997 A0A087WXM4 84 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SERINC4A6NH21 518 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 VSTM2BA6NLU5 285 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC1A7O00341 560 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 KPNA4O00629 521 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CDX4O14627 284 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 FFAR1O14842 300 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF264O43296 627 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CHP2O43745 196 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 GMFGO60234 142 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 MPZL2O60487 215 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 FMO6PO60774 539 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ICOSLGO75144 302 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZFAND5O76080 213 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PLGP00747 810 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGKV1D-16P01601 117 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 TK1P04183 234 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGKV3-11P04433 115 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 UMODP07911 640 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SMIM18P0DKX4 95 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SAGP10523 405 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 IFI30P13284 250 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTNP21246 168 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 S1PR1P21453 382 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 MMP11P24347 488 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ABCD3P28288 659 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ELK4P28324 431 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 FMO3P31513 532 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 OTX2P32243 289 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RYKP34925 604 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 GGT2P36268 569 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ETV5P41161 510 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RBM34P42696 430 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPR4P46093 362 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC6A8P48029 635 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SMSP52788 366 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CRISP1P54107 249 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 PNLIPRP2P54317 469 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 NR1H2P55055 460 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC26A5P58743 744 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPS15P62841 145 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPP38P78345 283 aaKnown RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 CD47Q08722 323 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 TSPAN31Q12999 210 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 APOFQ13790 326 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 EFR3AQ14156 821 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 MAD2L1BPQ15013 274 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR1Q1Q15612 314 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF141Q15928 474 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 EXT1Q16394 746 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 MEP1AQ16819 746 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 NDUFAF6Q330K2 333 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 C6orf141Q5SZD1 244 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPL13AP3Q6NVV1 102 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF613Q6PF04 617 aa3.4□□□□□ -1.87
HMGB3P20-201ENST00000417997 Q6ZPB1 254 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms