RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GAL3ST1Q99999 423 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 TMEM38AQ9H6F2 299 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 HINT3Q9NQE9 182 aaKnown RBP13.48□□□□□ -0.25
DDX55-202ENST00000354291 UBAP1Q9NZ09 502 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 VAPAQ9P0L0 249 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 MMP24Q9Y5R2 645 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 IGHV1-69-2A0A0G2JMI3 117 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 PRORSD1PA6NEY8 169 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 C17orf100A8MU93 164 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 CLDN25C9JDP6 229 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 FTCDNL1E5RQL4 147 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 SLC43A1O75387 559 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 GPANK1O95872 356 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 PNMTP11086 282 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 ZNF43P17038 809 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 GPX2P18283 190 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 SLC6A2P23975 617 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 CRYBB2P43320 205 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 RPS5P46782 204 aaKnown RBP13.47□□□□□ -0.25
DDX55-202ENST00000354291 TEKQ02763 1124 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 EGR4Q05215 589 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 GSG1Q2KHT4 349 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 TTMPQ5BVD1 217 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 KLF17Q5JT82 389 aaPredicted RBP13.47□□□□□ -0.25
DDX55-202ENST00000354291 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 DHRS4L2Q6PKH6 230 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 C6orf89Q6UWU4 347 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
DDX55-202ENST00000354291 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
DDX55-202ENST00000354291 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 MS4A7Q9GZW8 240 aaPredicted RBP13.47□□□□□ -0.25
DDX55-202ENST00000354291 INTS9Q9NV88 658 aaKnown RBP13.47□□□□□ -0.25
DDX55-202ENST00000354291 B3GNT2Q9NY97 397 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 AUP1Q9Y679 476 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 CACNG2Q9Y698 323 aa13.47□□□□□ -0.25
DDX55-202ENST00000354291 TRBV5-3A0A0A0MS03 114 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 ISPDA4D126 451 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.25
DDX55-202ENST00000354291 CLDN34H7C241 214 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 TIMM23O14925 209 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 SERPINB7O75635 380 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 CLPTM1O96005 669 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 PTDSS1P48651 473 aaKnown RBP13.46□□□□□ -0.25
DDX55-202ENST00000354291 SELENOVP59797 346 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 SCARB2Q14108 478 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 FXNQ16595 210 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 HFEQ30201 348 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 FAM69AQ5T7M9 428 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 FAM91A1Q658Y4 838 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 ULK3Q6PHR2 472 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 USP51Q70EK9 711 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 JAZF1Q86VZ6 243 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 DEFB108BQ8NET1 73 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 ST7LQ8TDW4 575 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 STON2Q8WXE9 905 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 SLC38A4Q969I6 547 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 KTI12Q96EK9 354 aaPredicted RBP13.46□□□□□ -0.25
DDX55-202ENST00000354291 OXGR1Q96P68 337 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 RBM4BQ9BQ04 359 aaKnown RBP13.46□□□□□ -0.25
DDX55-202ENST00000354291 PTDSS2Q9BVG9 487 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 EVA1AQ9H8M9 152 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 BEX1Q9HBH7 125 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 MMP26Q9NRE1 261 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 DECR2Q9NUI1 292 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 SELENONQ9NZV5 590 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.46□□□□□ -0.25
DDX55-202ENST00000354291 GPR160Q9UJ42 338 aa13.46□□□□□ -0.25
DDX55-202ENST00000354291 SOX21Q9Y651 276 aaPredicted RBP13.46□□□□□ -0.25
DDX55-202ENST00000354291 A0A1B0GUS0 222 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 A0A1B0GWA3 101 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 ZNF99A8MXY4 864 aaPredicted RBP13.45□□□□□ -0.26
DDX55-202ENST00000354291 M0R3G1 203 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 AIM2O14862 343 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 ZNF14P17017 642 aaPredicted RBP13.45□□□□□ -0.26
DDX55-202ENST00000354291 NCALDP61601 193 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 C1DQ13901 141 aaKnown RBP13.45□□□□□ -0.26
DDX55-202ENST00000354291 MFSD13AQ14CX5 517 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 PCGF3Q3KNV8 242 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 MMEL1Q495T6 779 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 ALG10BQ5I7T1 473 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 RHOUQ7L0Q8 258 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 HDXQ7Z353 690 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 C10orf111Q8N326 155 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 SNX33Q8WV41 574 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 TAAR8Q969N4 342 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 SLC47A1Q96FL8 570 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 TSPAN32Q96QS1 320 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 CITED1Q99966 193 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 RSPO3Q9BXY4 272 aaPredicted RBP13.45□□□□□ -0.26
DDX55-202ENST00000354291 TMEM27Q9HBJ8 222 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 LEF1Q9UJU2 399 aaPredicted RBP13.45□□□□□ -0.26
DDX55-202ENST00000354291 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 TRIM33Q9UPN9 1127 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 RCE1Q9Y256 329 aa13.45□□□□□ -0.26
DDX55-202ENST00000354291 TRAV36DV7A0A075B6V5 113 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 IGHV3OR16-10A0A075B7F0 116 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 LOC102725191A0A1B0GVB3 256 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 TPST1O60507 370 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms