RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ZNF627Q7L945 461 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 LINC00471Q8N535 108 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 FAM169BQ8N8A8 192 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 RBP7Q96R05 134 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 ALG12Q9BV10 488 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 KATNB1Q9BVA0 655 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 GRHPRQ9UBQ7 328 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 FBXL3Q9UKT7 428 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 ATP23Q9Y6H3 246 aa16.75■□□□□ 0.27
SYNE4-202ENST00000340477 CADP27708 2225 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 OTOGQ6ZRI0 2925 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 TCRBV5S2A0A599 114 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 RAB36O95755 333 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 CBR1P16152 277 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 OMPP47874 163 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 MS4A2Q01362 244 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 SPOCK1Q08629 439 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 NPRL3Q12980 569 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 FLOT2Q14254 428 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 SEC23BQ15437 767 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 GSG1Q2KHT4 349 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 IQCCQ4KMZ1 466 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 DPPA2Q7Z7J5 298 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 WDFY1Q8IWB7 410 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 SMAP2Q8WU79 429 aaPredicted RBP16.74■□□□□ 0.27
SYNE4-202ENST00000340477 MCHR2Q969V1 340 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 MRPL13Q9BYD1 178 aaKnown RBP16.74■□□□□ 0.27
SYNE4-202ENST00000340477 DENND2DQ9H6A0 471 aaPredicted RBP16.74■□□□□ 0.27
SYNE4-202ENST00000340477 SMURF2Q9HAU4 748 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 CRNNQ9UBG3 495 aaPredicted RBP16.74■□□□□ 0.27
SYNE4-202ENST00000340477 LAMP3Q9UQV4 416 aa16.74■□□□□ 0.27
SYNE4-202ENST00000340477 IGHV1-18A0A0C4DH31 117 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 AQP12BA6NM10 295 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 TNFRSF11BO00300 401 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 ARHGEF9O43307 516 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 CD14P08571 375 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 OR8G3PP0DMU2 310 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 RAP2AP10114 183 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 GUCA1AP43080 201 aaPredicted RBP16.73■□□□□ 0.27
SYNE4-202ENST00000340477 MAGEA2P43356 314 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 LIMS1P48059 325 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 IDH3GP51553 393 aaPredicted RBP16.73■□□□□ 0.27
SYNE4-202ENST00000340477 ERVK-25P63136 954 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 MYBPC1Q00872 1141 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 RUNX1T1Q06455 604 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 BNIP1Q12981 228 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 LRFN4Q6PJG9 635 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 MDP1Q86V88 176 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 AQP12AQ8IXF9 295 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 FANK1Q8TC84 345 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 NEUROG1Q92886 237 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 GTPBP3Q969Y2 492 aaKnown RBP16.73■□□□□ 0.27
SYNE4-202ENST00000340477 ZNF570Q96NI8 536 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 TSPAN32Q96QS1 320 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 CXXC4Q9H2H0 198 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 KCNN2Q9H2S1 579 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 REEP1Q9H902 201 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 TMEM38BQ9NVV0 291 aa16.73■□□□□ 0.27
SYNE4-202ENST00000340477 ZNF346Q9UL40 294 aaKnown RBP16.73■□□□□ 0.27
SYNE4-202ENST00000340477 ATP6V1G2-DDX39BF2Z307 99 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 MGRN1O60291 552 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 IGKV3-15P01624 115 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 HLA-HP01893 362 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 FPR3P25089 353 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 HIST3H3Q16695 136 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SLC36A2Q495M3 483 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 NRN1LQ496H8 165 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 THEM4Q5T1C6 240 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 C10orf128Q5T292 105 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 AGAP6Q5VW22 663 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 GPR139Q6DWJ6 353 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SMARCD3Q6STE5 483 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SPNS3Q6ZMD2 512 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 FBXL14Q8N1E6 418 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 LRRC75A-AS1Q8N1F1 130 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SLC22A24Q8N4F4 322 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 ARIH2OSQ8N7S6 290 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 LRRC75AQ8NAA5 344 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 IL17RDQ8NFM7 739 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 LILRB1Q8NHL6 650 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-202ENST00000340477 HDAC2Q92769 488 aaKnown RBP16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SLC7A6OSQ96CW6 309 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-202ENST00000340477 KCNK17Q96T54 332 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 DHRS9Q9BPW9 319 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 FUZQ9BT04 418 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 SIGLEC7Q9Y286 467 aa16.72■□□□□ 0.27
SYNE4-202ENST00000340477 DHRS12A0PJE2 317 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 IGLV1-44P01699 117 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 CECR9P0C854 216 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 NPR2P20594 1047 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 PTDSS1P48651 473 aaKnown RBP16.71■□□□□ 0.27
SYNE4-202ENST00000340477 FABP6P51161 128 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 RPS6KA3P51812 740 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 NAAAQ02083 359 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 TESK1Q15569 626 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 OR2T5Q6IEZ7 315 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 ZNF544Q6NX49 715 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 TMEM53Q6P2H8 277 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms