RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CASP12Q6UXS9 341 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 LNX2Q8N448 690 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 IQCF1Q8N6M8 205 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 OR52L1Q8NGH7 329 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 OR8J1Q8NGP2 316 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MFSD8Q8NHS3 518 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 AP3S1Q92572 193 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 UBE2FQ969M7 185 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MGLLQ99685 303 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MARVELD1Q9BSK0 173 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 ASPNQ9BXN1 380 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 OR11A1Q9GZK7 315 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 IMPAD1Q9NX62 359 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 DKKL1Q9UK85 242 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 ING4Q9UNL4 249 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 SPIN1Q9Y657 262 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-202ENST00000324340 KLRC4-KLRK1H3BQV0 150 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 GLSO94925 669 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-202ENST00000324340 AHSA1O95433 338 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 HMGN1P05114 100 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 SLC6A6P31641 620 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 B3GALT5-AS1P59052 145 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 FOXK1P85037 733 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 GRK1Q15835 563 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 BAK1Q16611 211 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 SYT14P1Q58G82 188 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 CLEC12AQ5QGZ9 265 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 IGFL3Q6UXB1 125 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 MAMDC2Q7Z304 686 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-202ENST00000324340 GPAT4Q86UL3 456 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 FAM26EQ8N5C1 309 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 LRRC75AQ8NAA5 344 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 ARL5BQ96KC2 179 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 C5orf34Q96MH7 638 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 PIGQQ9BRB3 760 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 TEX12Q9BXU0 123 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 HES7Q9BYE0 225 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 C11orf54Q9H0W9 315 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-202ENST00000324340 EMC7Q9NPA0 242 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 RASSF1Q9NS23 344 aa11.46□□□□□ -0.57
DDX39A-202ENST00000324340 PCDHGA9Q9Y5G4 932 aaKnown RBP11.46□□□□□ -0.57
DDX39A-202ENST00000324340 NCKAP5O14513 1909 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 MPDZO75970 2070 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 OR2M5A3KFT3 312 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 A8MV72 311 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-202ENST00000324340 TOR1AO14656 332 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 ARPC3O15145 178 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 SURF4O15260 269 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 PRKYO43930 277 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 HPNP05981 417 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 APEHP13798 732 aaKnown RBP11.45□□□□□ -0.58
DDX39A-202ENST00000324340 C4BPBP20851 252 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 TLE3Q04726 772 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 GALEQ14376 348 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 SGCBQ16585 318 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 OCLNQ16625 522 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 TEX261Q6UWH6 196 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 DPY19L2P2Q6ZN68 376 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 PTCHD4Q6ZW05 846 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 GALNTL5Q7Z4T8 443 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 ZFP62Q8NB50 900 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-202ENST00000324340 TMEM178AQ8NBL3 297 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 OR9Q1Q8NGQ5 310 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 OR5J2Q8NH18 312 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 AKAP1Q92667 903 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDX39A-202ENST00000324340 CREB3L1Q96BA8 519 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 UBL7Q96S82 380 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-202ENST00000324340 TTTY12Q9BZ98 90 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 NRIP3Q9NQ35 241 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 TVP23BQ9NYZ1 205 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 B4GALT7Q9UBV7 327 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 IL20RAQ9UHF4 553 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 RPH3AQ9Y2J0 694 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-202ENST00000324340 HSPB11Q9Y547 144 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 U3KQ87 197 aa11.45□□□□□ -0.58
DDX39A-202ENST00000324340 A0A0B4J293 547 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 LIPT2A6NK58 231 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 LINC01387J3KSC0 135 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 K7ENP7 123 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 M0R129 80 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 RRP8O43159 456 aaKnown RBP11.44□□□□□ -0.58
DDX39A-202ENST00000324340 PTHP01270 115 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 RAF1P04049 648 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 HIST1H2ABP04908 130 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 CSF3P09919 207 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 PEPDP12955 493 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 PRKACAP17612 351 aa11.44□□□□□ -0.58
DDX39A-202ENST00000324340 PSMA1P25786 263 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms