RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GLSO94925 669 aaPredicted RBP18■□□□□ 0.47
CRLF3-201ENST00000324238 ITGA5P08648 1049 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 FNTBP49356 437 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 ZNF74Q16587 644 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 FAM74A1Q5RGS3 127 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 PRSS42Q7Z5A4 293 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 MCATQ8IVS2 390 aaKnown RBP18■□□□□ 0.47
CRLF3-201ENST00000324238 ZNF563Q8TA94 476 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 TSPAN32Q96QS1 320 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 MAP3K3Q99759 626 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 TPSD1Q9BZJ3 242 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 OR2M5A3KFT3 312 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 ARPC3O15145 178 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 PRAF2O60831 178 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 SEMA4FO95754 770 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 WNT11O96014 354 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 CD14P08571 375 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 POU2F2P09086 479 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 GABRG2P18507 467 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 AKT2P31751 481 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 POU3F4P49335 361 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 SEC61A1P61619 476 aaKnown RBP18■□□□□ 0.47
CRLF3-201ENST00000324238 LRRC37A5PQ49AS3 106 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 BEX5Q5H9J7 111 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 TMUB2Q71RG4 321 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 KDM8Q8N371 416 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 KLHL15Q96M94 604 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 ADOQ96SZ5 270 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 PNO1Q9NRX1 252 aaKnown RBP18■□□□□ 0.47
CRLF3-201ENST00000324238 CLEC1BQ9P126 229 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 OR4C45A6NMZ5 311 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 TNFP01375 233 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 ZNF141Q15928 474 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 SLC16A9Q7RTY1 509 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 FAM122BQ7Z309 247 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 GPAT4Q86UL3 456 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 GAL3ST4Q96RP7 486 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 TTYH1Q9H313 450 aaPredicted RBP18■□□□□ 0.47
CRLF3-201ENST00000324238 RNF215Q9Y6U7 377 aa18■□□□□ 0.47
CRLF3-201ENST00000324238 TMEM272A0A1B0GTI8 110 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 NUDT14O95848 222 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 HOXD4P09016 255 aaPredicted RBP17.99■□□□□ 0.47
CRLF3-201ENST00000324238 THEGLP0DJG4 465 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 ELFN2Q5R3F8 820 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 PMEPA1Q969W9 287 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 OR8D2Q9GZM6 311 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 GPN1Q9HCN4 374 aaPredicted RBP17.99■□□□□ 0.47
CRLF3-201ENST00000324238 CGGBP1Q9UFW8 167 aaPredicted RBP17.99■□□□□ 0.47
CRLF3-201ENST00000324238 FBXO4Q9UKT5 387 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 WDFY4Q6ZS81 3184 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 UNC13CQ8NB66 2214 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 CELSR3Q9NYQ7 3312 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 ABHD16AO95870 558 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 GIPP09681 153 aaPredicted RBP17.99■□□□□ 0.47
CRLF3-201ENST00000324238 TAAR8Q969N4 342 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 TOE1Q96GM8 510 aaKnown RBP17.99■□□□□ 0.47
CRLF3-201ENST00000324238 PTDSS2Q9BVG9 487 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 MMP25Q9NPA2 562 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 PRDM9Q9NQV7 894 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 OPN4Q9UHM6 478 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 CLDN16Q9Y5I7 305 aa17.99■□□□□ 0.47
CRLF3-201ENST00000324238 TACSTD2P09758 323 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 TACR3P29371 465 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 KIR3DL2P43630 455 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 RPS4XP62701 263 aaKnown RBP17.98■□□□□ 0.47
CRLF3-201ENST00000324238 ATXN7L3Q14CW9 347 aaPredicted RBP17.98■□□□□ 0.47
CRLF3-201ENST00000324238 WDR38Q5JTN6 314 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 ADGRG3Q86Y34 549 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 NKD1Q969G9 470 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 MNTQ99583 582 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 ATG5Q9H1Y0 275 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 DZANK1Q9NVP4 752 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 CD207Q9UJ71 328 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 CDV3Q9UKY7 258 aaKnown RBP17.98■□□□□ 0.47
CRLF3-201ENST00000324238 NAP1L6A6NFF2 107 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 PPM1BO75688 479 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 PNPP00491 289 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 RAB40ALP0C0E4 278 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 S100A11P31949 105 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 NUP62P37198 522 aaPredicted RBP17.98■□□□□ 0.47
CRLF3-201ENST00000324238 GPR3P46089 330 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 RAP2BP61225 183 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 C2orf76Q3KRA6 126 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 OLFML2AQ68BL7 652 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 CHRDL2Q6WN34 429 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 ZNF627Q7L945 461 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 RAB40AQ8WXH6 277 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 EXO5Q9H790 373 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 ELOVL3Q9HB03 270 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 C12orf4Q9NQ89 552 aa17.98■□□□□ 0.47
CRLF3-201ENST00000324238 KCNAB3O43448 404 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 CTAG2O75638 210 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 PRPS1P60891 318 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 ARHGAP40Q5TG30 622 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 NKAIN2Q5VXU1 208 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 ABCA7Q8IZY2 2146 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 RADILQ96JH8 1075 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 NXF5Q9H1B4 397 aaKnown RBP17.97■□□□□ 0.47
CRLF3-201ENST00000324238 POLE3Q9NRF9 147 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 SOHLH2Q9NX45 425 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms