RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 GNB4Q9HAV0 340 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 C1orf123Q9NWV4 160 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 CHRNA9Q9UGM1 479 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 A0A1W2PPC4 97 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 TMEM82A0PJX8 343 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 OR6C76A6NM76 312 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 CR2P20023 1033 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 TEKQ02763 1124 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 NOXA1Q86UR1 476 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 CTDSP2O14595 271 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 GLCEO94923 617 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 IL3RAP26951 378 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 RPL27P61353 136 aaKnown RBP15.87■□□□□ 0.13
SHANK1-201ENST00000293441 LINC01599Q8WXQ3 324 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 TSLPQ969D9 159 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 PDFQ9HBH1 243 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 PSORS1C1Q9UIG5 152 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 PPT2Q9UMR5 302 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 MEIOCA2RUB1 952 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF732B4DXR9 585 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 M0R082 166 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 DEGS1O15121 323 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 GNB3P16520 340 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 ARNTP27540 789 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 CPEB2Q7Z5Q1 589 aaKnown RBP15.87■□□□□ 0.13
SHANK1-201ENST00000293441 OSGIN1Q9UJX0 560 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 EDARQ9UNE0 448 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 KLF13Q9Y2Y9 288 aaPredicted RBP15.87■□□□□ 0.13
SHANK1-201ENST00000293441 SLC22A23A1A5C7 686 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 DSCR3O14972 297 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 SGCEO43556 437 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 DEFA4P12838 97 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 GLB1P16278 677 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 ARHGAP11BQ3KRB8 267 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 LHX8Q68G74 356 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 SLC25A43Q8WUT9 341 aaPredicted RBP15.87■□□□□ 0.13
SHANK1-201ENST00000293441 CSF3RQ99062 836 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 EGLN1Q9GZT9 426 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 FGF17O60258 216 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 GMDSO60547 372 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 SORDQ00796 357 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 SFXN4Q6P4A7 337 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 OR7G2Q8NG99 324 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 A0A1W2PNR3 127 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 LCMT2O60294 686 aaKnown RBP15.87■□□□□ 0.13
SHANK1-201ENST00000293441 CDK4P11802 303 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 HSF1Q00613 529 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 SAXO2Q658L1 398 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 KIF25Q9UIL4 384 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 NTNG1Q9Y2I2 539 aa15.87■□□□□ 0.13
SHANK1-201ENST00000293441 CXCL10P02778 98 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 TEAD1P28347 426 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 BAXQ07812 192 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF546Q86UE3 836 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 NKAIN4Q8IVV8 208 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 FAM71CQ8NEG0 241 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 MYEOVQ96EZ4 313 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 HRH4Q9H3N8 390 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 EMC7Q9NPA0 242 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF891A8MT65 544 aaPredicted RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF701M0R085 212 aaPredicted RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 SPINT2O43291 252 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ICOSLGO75144 302 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 FBXO24O75426 580 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 SCG5P05408 212 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 CTSLP07711 333 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 NFYAP23511 347 aaPredicted RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 SSTR2P30874 369 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 RAD52P43351 418 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 KHDC1LQ5JSQ8 128 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 GLYATL3Q5SZD4 288 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 C11orf40Q8WZ69 217 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 RPL3LQ92901 407 aaKnown RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 CHST11Q9NPF2 352 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 M0R1B8 84 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 PRKNO60260 465 aaPredicted RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 RFC3P40938 356 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 TSSK2Q96PF2 358 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ABHD6Q9BV23 337 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 SLA2Q9H6Q3 261 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ZMAT3Q9HA38 289 aaKnown RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 URB1O60287 2271 aaKnown RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 IGHV3-15A0A0B4J1V0 119 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 C7orf72A4D263 438 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 CLDN24A6NM45 220 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 CLDN1O95832 211 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 IL2RAP01589 272 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 CCL7P80098 99 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 DUSP2Q05923 314 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 POU4F3Q15319 338 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 RBMS2Q15434 407 aaKnown RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 CLVS2Q5SYC1 327 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 LAX1Q8IWV1 398 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 TXNL4BQ9NX01 149 aaKnown RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 NSA2O95478 260 aaKnown RBP15.86■□□□□ 0.13
SHANK1-201ENST00000293441 OLFM2O95897 454 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF728P0DKX0 622 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 MAP2K6P52564 334 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 DLX5P56178 289 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms