RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 CRABP1P29762 137 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 DAP3P51398 398 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 MC2RQ01718 297 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 RASGEF1BQ0VAM2 473 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 MELKQ14680 651 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 NTRK2Q16620 822 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 FAM199XQ6PEV8 388 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 PLET1Q6UQ28 207 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 OR10G3Q8NGC4 313 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 OR5H6Q8NGV6 325 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 MR1Q95460 341 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 RFT1Q96AA3 541 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 SPACA9Q96E40 222 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 CMTM3Q96MX0 182 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 FRMD6Q96NE9 622 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 THAP7Q9BT49 309 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 POTEKPQ9BYX7 375 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 KCNG2Q9UJ96 466 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 RALGAPA1Q6GYQ0 2036 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 FAM240BA0A1B0GVZ2 78 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 TMEM212A6NML5 194 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 NPIPA5E9PKD4 350 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 MS4A18H0YCH9 400 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ETV2O00321 342 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 CTLA4P16410 223 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 PTGDSP41222 190 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 RPS27P42677 84 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 PITPNAQ00169 270 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 PCOLCEQ15113 449 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 MS4A18Q3C1V0 323 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC25A53Q5H9E4 307 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC18B1Q6NT16 456 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 BAIAP2L2Q6UXY1 529 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 DTX3Q8N9I9 347 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 OR2G2Q8NGZ5 317 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ELP5Q8TE02 316 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 RASL10BQ96S79 203 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ULBP3Q9BZM4 244 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 TSPAN10Q9H1Z9 355 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 TCF7L1Q9HCS4 588 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 CHST11Q9NPF2 352 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 CLEC4AQ9UMR7 237 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 NPIPA1Q9UND3 350 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 A0A0B4J203 849 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 TRBV5-5A0A0J9YX44 114 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 A0A1B0GVC2 190 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 A6NIN4 97 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 FAM47E-STBD1D6RA91 191 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 TP53I11O14683 189 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 SPARCP09486 303 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 PSKH1P11801 424 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 HLA-DOBP13765 273 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 IL11P20809 199 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 NR4A2P43354 598 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ADAM8P78325 824 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 TLE3Q04726 772 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 GLO1Q04760 184 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 PLPPR5Q32ZL2 321 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 UBE2NLQ5JXB2 153 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 HACD4Q5VWC8 232 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 RSBN1Q5VWQ0 802 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 FAM205BPQ63HN1 556 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 DNM1P34Q6PK57 102 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 KDM8Q8N371 416 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF433Q8N7K0 673 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF676Q8N7Q3 588 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ASB10Q8WXI3 467 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 C5orf34Q96MH7 638 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 FOXN4Q96NZ1 517 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 OR8B4Q96RC9 309 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 SERINC1Q9NRX5 453 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 MRPL22Q9NWU5 206 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 SLCO1C1Q9NYB5 712 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 ING1Q9UK53 422 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 FBXO4Q9UKT5 387 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 V9GY05 133 aa11.63□□□□□ -0.55
SPTLC1-201ENST00000262554 NPIPB13A6NJU9 1138 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 LIPT2A6NK58 231 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 OR4C45A6NMZ5 311 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 IFITM5A6NNB3 132 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 NPIPB4C9JG80 1138 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 H3BML4 177 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 AIPO00170 330 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF254O75437 659 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 UBL3O95164 117 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 TRAPPC2P0DI81 140 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 TRAPPC2BP0DI82 140 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 CCL4P13236 92 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 IFNGR1P15260 489 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 MAGEB1P43366 347 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 EXT1Q16394 746 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 MEP1BQ16820 701 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 DMRTA1Q5VZB9 504 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 FDX2Q6P4F2 183 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms