RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 LUZP2Q86TE4 346 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 GPR137CQ8N3F9 429 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ACBD4Q8NC06 268 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 C1orf162Q8NEQ5 155 aaPredicted RBP12.43□□□□□ -0.42
VPS25-201ENST00000253794 RNASE6Q93091 150 aaKnown RBP12.43□□□□□ -0.42
VPS25-201ENST00000253794 RASD2Q96D21 266 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 LRRC46Q96FV0 321 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 RBM24Q9BX46 236 aaKnown RBP12.43□□□□□ -0.42
VPS25-201ENST00000253794 GRIP2Q9C0E4 1043 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 TAS2R16Q9NYV7 291 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 KLHL21Q9UJP4 597 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ORC6Q9Y5N6 252 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 FAM90A27PA6NNH2 459 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 H0YJX3 145 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 IGHV3-9P01782 118 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 HMGN1P05114 100 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 ITGA5P08648 1049 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 IGHV1-2P23083 117 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 POU1F1P28069 291 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 EPHA2P29317 976 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 CDKN2AP42771 156 aaKnown RBP12.42□□□□□ -0.42
VPS25-201ENST00000253794 MYBPC1Q00872 1141 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 FAPQ12884 760 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 C12orf73Q69YU5 71 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 SLC25A47Q6Q0C1 308 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 FOXL2NBQ6ZUU3 175 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 ZNF433Q8N7K0 673 aaPredicted RBP12.42□□□□□ -0.42
VPS25-201ENST00000253794 NPEPL1Q8NDH3 523 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 OR6N1Q8NGY5 312 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 NRG4Q8WWG1 115 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 MCHR2Q969V1 340 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 HRASLS5Q96KN8 279 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 ALKBH3Q96Q83 286 aaPredicted RBP12.42□□□□□ -0.42
VPS25-201ENST00000253794 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
VPS25-201ENST00000253794 HDHD5Q9BXW7 423 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 ULBP2Q9BZM5 246 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 NMNAT2Q9BZQ4 307 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 GALNT8Q9NY28 637 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 SMPD3Q9NY59 655 aaPredicted RBP12.42□□□□□ -0.42
VPS25-201ENST00000253794 UPB1Q9UBR1 384 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 GPR52Q9Y2T5 361 aa12.42□□□□□ -0.42
VPS25-201ENST00000253794 SPTBN1Q01082 2364 aaKnown RBP12.42□□□□□ -0.42
VPS25-201ENST00000253794 NKX2-6A6NCS4 301 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 ZNF99A8MXY4 864 aaPredicted RBP12.41□□□□□ -0.42
VPS25-201ENST00000253794 M0R3G1 203 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 SURF4O15260 269 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 ARHGEF9O43307 516 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 IFNGP01579 166 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 IGFBP2P18065 325 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 NOS3P29474 1203 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 CCKARP32238 428 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 PEX19P40855 299 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 EFNB1P98172 346 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 ROR2Q01974 943 aaKnown RBP12.41□□□□□ -0.42
VPS25-201ENST00000253794 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS25-201ENST00000253794 SFRP5Q5T4F7 317 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 CARD17Q5XLA6 110 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 ZBTB46Q86UZ6 589 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 UBE2J2Q8N2K1 259 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 C17orf78Q8N4C9 275 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 IQCF1Q8N6M8 205 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 SYT14Q8NB59 555 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 OR4K13Q8NH42 304 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 RBP7Q96R05 134 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 MBOAT4Q96T53 435 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 PITX2Q99697 317 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 TEX12Q9BXU0 123 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 PRRG3Q9BZD7 231 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 RACGAP1Q9H0H5 632 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 FN3KQ9H479 309 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 CRLF2Q9HC73 371 aa12.41□□□□□ -0.42
VPS25-201ENST00000253794 USP9YO00507 2555 aaPredicted RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 IGKV1D-43A0A0B4J1Z2 117 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 OR6C68A6NDL8 312 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 RIIAD1A6NNX1 92 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 SLC16A6O15403 523 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 DHHO43323 396 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 KRT33AO76009 404 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 QDPRP09417 244 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 UGT2B10P36537 528 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 POLR2IP36954 125 aaKnown RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 SLC25A1P53007 311 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
VPS25-201ENST00000253794 TGFBR3Q03167 851 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 CD47Q08722 323 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 GABRA6Q16445 453 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 SLC35F1Q5T1Q4 408 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 TMEM236Q5W0B7 351 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 LEG1Q6P5S2 330 aa12.4□□□□□ -0.42
VPS25-201ENST00000253794 SSX8Q7RTT4 187 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms