RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 SRSF4Q08170 494 aaKnown RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 LRRC74AQ0VAA2 488 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 H1FNTQ75WM6 255 aaPredicted RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 KIRREL3Q8IZU9 778 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 CLIP4Q8N3C7 705 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 GLB1L3Q8NCI6 653 aaPredicted RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 ZBTB18Q99592 522 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 B3GAT2Q9NPZ5 323 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 HAO1Q9UJM8 370 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 PURGQ9UJV8 347 aaKnown RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 ZNF443Q9Y2A4 671 aaPredicted RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
FARP1-237ENST00000601853 AUP1Q9Y679 476 aa12.87□□□□□ -0.35
FARP1-237ENST00000601853 M0R082 166 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 RFXANKO14593 260 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 OR2T1O43869 369 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ETFAP13804 333 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 B4GALT1P15291 398 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 BGNP21810 368 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 OMGP23515 440 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 CRATP43155 626 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 CRISP3P54108 245 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ZNF154Q13106 437 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 STX3Q13277 289 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 CAMK2DQ13557 499 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
FARP1-237ENST00000601853 MOGQ16653 247 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 KRT71Q3SY84 523 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 CARD17Q5XLA6 110 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 NHLRC1Q6VVB1 395 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 NET1Q7Z628 596 aaPredicted RBP12.86□□□□□ -0.35
FARP1-237ENST00000601853 SNX32Q86XE0 403 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ZNF417Q8TAU3 575 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ZNF519Q8TB69 540 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ST7LQ8TDW4 575 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 C11orf40Q8WZ69 217 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 CCT8L2Q96SF2 557 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ZNF587Q96SQ5 575 aaPredicted RBP12.86□□□□□ -0.35
FARP1-237ENST00000601853 CITED1Q99966 193 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 TMEM109Q9BVC6 243 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 SAP30LQ9HAJ7 183 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 SLC6A13Q9NSD5 602 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 CALML5Q9NZT1 146 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
FARP1-237ENST00000601853 MS4A18H0YCH9 400 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 M0QZ24 198 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 SDHDO14521 159 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 TPD52L2O43399 206 aaKnown RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 ALX3O95076 343 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 KNG1P01042 644 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 BCHEP06276 602 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 FAM157BP0CG42 384 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 MVDP53602 400 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 MS4A18Q3C1V0 323 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 RPS26P11Q5JNZ5 115 aaPredicted RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 ZNF362Q5T0B9 420 aaPredicted RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 RNF220Q5VTB9 566 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 RHOUQ7L0Q8 258 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 SKA3Q8IX90 412 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 ADPRHL1Q8NDY3 354 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 AENQ8WTP8 325 aaKnown RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 SLC38A5Q8WUX1 472 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 CCL17Q92583 94 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 FOXB1Q99853 325 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 EMC6Q9BV81 110 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 SPATA9Q9BWV2 254 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 ARMC7Q9H6L4 198 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
FARP1-237ENST00000601853 CHST2Q9Y4C5 530 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
FARP1-237ENST00000601853 TM9SF1O15321 606 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 HPRP00739 348 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 PATE4P0C8F1 98 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 HLA-DOBP13765 273 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 ZNF12P17014 697 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 EPHA3P29320 983 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 GRPRP30550 384 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 PCGF2P35227 344 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 MTNR1AP48039 350 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 DSTNP60981 165 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 HOXC5Q00444 222 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 SLC3A1Q07837 685 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 BST1Q10588 318 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 TSTQ16762 297 aaKnown RBP12.84□□□□□ -0.35
FARP1-237ENST00000601853 FAM209AQ5JX71 171 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
FARP1-237ENST00000601853 C9orf139Q6ZV77 190 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms