RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RCE1Q9Y256 329 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 FAM32AQ9Y421 112 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 NOX1Q9Y5S8 564 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 CH25HO95992 272 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 IGF2P01344 180 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 MT-ND1P03886 318 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 IGFBP5P24593 272 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 NR4A2P43354 598 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 CLDN17P56750 224 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF74Q16587 644 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 NIPAL3Q6P499 406 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 WDR88Q6ZMY6 472 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 TSPYL5Q86VY4 417 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 KDM8Q8N371 416 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 FBXO17Q96EF6 278 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 SORCS2Q96PQ0 1159 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 PIMREGQ9BSJ6 248 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 KATNB1Q9BVA0 655 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 MYOZ1Q9NP98 299 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF229Q9UJW7 825 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 KCNS2Q9ULS6 477 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 MED31Q9Y3C7 131 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 PLCE1Q9P212 2302 aa15.26■□□□□ 0.03
SHKBP1-203ENST00000594298 IGHV1-18A0A0C4DH31 117 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 MS4A18H0YCH9 400 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 KPNA4O00629 521 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 PLPP3O14495 311 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 PDE5AO76074 875 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 UMPSP11172 480 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 SRD5A1P18405 259 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 AHCYP23526 432 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 SNRPD2P62316 118 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 PUDPQ08623 228 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 TRAM2Q15035 370 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 FXNQ16595 210 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 MS4A18Q3C1V0 323 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 HIKESHIQ53FT3 197 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 FAM166AQ6J272 317 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 TRPM8Q7Z2W7 1104 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 PXKQ7Z7A4 578 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 LSRQ86X29 649 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 NKAIN4Q8IVV8 208 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 ARIH2OSQ8N7S6 290 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 FAM156AQ8NDB6 213 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 MOGAT1Q96PD6 335 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 SLC38A2Q96QD8 506 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 SEC14L4Q9UDX3 406 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 A4GNTQ9UNA3 340 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 SNX13Q9Y5W8 968 aa15.25■□□□□ 0.03
SHKBP1-203ENST00000594298 ALPK2Q86TB3 2170 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 LOC390937A0A1W2PQ73 354 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 SLC43A1O75387 559 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 ADORA3P0DMS8 318 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 ITGA2P17301 1181 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 CDH2P19022 906 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 SERPINF1P36955 418 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 YAP1P46937 504 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 SELENOPP49908 381 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 ZP4Q12836 540 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 GGTLC2Q14390 218 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 EFNB3Q15768 340 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 C3orf36Q3SXR2 165 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 TBRG1Q3YBR2 411 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 OFCC1Q8IZS5 231 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 RBM15BQ8NDT2 890 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 PIK3C3Q8NEB9 887 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 OR1K1Q8NGR3 316 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 TMEM255BQ8WV15 326 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 MSI2Q96DH6 328 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 SGTBQ96EQ0 304 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 PYURFQ96I23 114 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 LINC00470Q9BZP3 86 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 C1orf21Q9H246 121 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 MOV10Q9HCE1 1003 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 CA10Q9NS85 328 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 B3GAT1Q9P2W7 334 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 CRNNQ9UBG3 495 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 ENPP4Q9Y6X5 453 aa15.24■□□□□ 0.03
SHKBP1-203ENST00000594298 ARPC4-TTLL3A0A0A6YYG9 625 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 LOC100289279A0A1B0GTE1 492 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF726A6NNF4 738 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 B9A039 149 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF587BE7ETH6 402 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 LRRN3E7EW58 273 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 FUT1P19526 365 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 POU3F1Q03052 451 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 FAM120AOSQ5T036 256 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 RRM2BQ7LG56 351 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 NANOGNBQ7Z5D8 188 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 CDK20Q8IZL9 346 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 RNF113BQ8IZP6 322 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 FAM169BQ8N8A8 192 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 ANKK1Q8NFD2 765 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 MAGEE2Q8TD90 523 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 MCUR1Q96AQ8 359 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 KCNS3Q9BQ31 491 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 MUC13Q9H3R2 512 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 ANKRD19PQ9H560 264 aa15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 MEPEQ9NQ76 525 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms