RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 DEFB108BQ8NET1 73 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 FGFBP3Q8TAT2 258 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 UBLCP1Q8WVY7 318 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-208ENST00000573716 SLC38A4Q969I6 547 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 UBE2FQ969M7 185 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 APOPT1Q96IL0 206 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 TXNDC15Q96J42 360 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 CCDC115Q96NT0 180 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 MRI1Q9BV20 369 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 DENND2DQ9H6A0 471 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-208ENST00000573716 AKTIPQ9H8T0 292 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 RNF121Q9H920 327 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 MMP26Q9NRE1 261 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 TNFRSF19Q9NS68 423 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 NKIRAS2Q9NYR9 191 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 P2RX2Q9UBL9 471 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 LEF1Q9UJU2 399 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-208ENST00000573716 PURGQ9UJV8 347 aaKnown RBP10.34□□□□□ -0.75
PRPF8-208ENST00000573716 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
PRPF8-208ENST00000573716 M0QZ24 198 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 OR2T1O43869 369 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF500O60304 480 aaPredicted RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 SPAG7O75391 227 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ALX3O95076 343 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 SERPINA5P05154 406 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 SBK2P0C263 348 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF250P15622 560 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 CDKN2CP42773 168 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF81P51508 661 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 CLNS1AP54105 237 aaKnown RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 HNRNPA0Q13151 305 aaKnown RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 FAM69AQ5T7M9 428 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 RNF220Q5VTB9 566 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF584Q8IVC4 421 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 C10orf53Q8N6V4 93 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 SYT14Q8NB59 555 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF519Q8TB69 540 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 TESCQ96BS2 214 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 TRIM44Q96DX7 344 aaPredicted RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 DCLRE1CQ96SD1 692 aaKnown RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 SH3GL3Q99963 347 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 ARMC7Q9H6L4 198 aa10.33□□□□□ -0.76
PRPF8-208ENST00000573716 TESQ9UGI8 421 aaKnown RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
PRPF8-208ENST00000573716 IGLV3-9A0A075B6K5 115 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 TRAV36DV7A0A075B6V5 113 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 TLDC2A0PJX2 215 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 E9PBE3 544 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 MS4A18H0YCH9 400 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 ETFAP13804 333 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 CRATP43155 626 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 MTNR1AP48039 350 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 CSNK1A1P48729 337 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 CRISP3P54108 245 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 TXNL4AP83876 142 aaKnown RBP10.32□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF154Q13106 437 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 MAPK11Q15759 364 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 MOGQ16653 247 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 SMU1Q2TAY7 513 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 MS4A18Q3C1V0 323 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 TMEM53Q6P2H8 277 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 WFDC12Q8WWY7 111 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 ANP32BQ92688 251 aaKnown RBP10.32□□□□□ -0.76
PRPF8-208ENST00000573716 LRR1Q96L50 414 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 C16orf45Q96MC5 204 aaPredicted RBP10.32□□□□□ -0.76
PRPF8-208ENST00000573716 SPATA9Q9BWV2 254 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 ASPNQ9BXN1 380 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 MMP27Q9H306 513 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 CALML5Q9NZT1 146 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 BTNL2Q9UIR0 455 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 PRDM4Q9UKN5 801 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
PRPF8-208ENST00000573716 A0A087WUJ7 227 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 MDFIC2A0A1B0GVS7 189 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 CLDN34H7C241 214 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 KRT75O95678 551 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 IGHMP01871 453 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 CRYBA1P05813 215 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 CCNOP22674 350 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 AHCYP23526 432 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 SERPINB5P36952 375 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 UCP2P55851 309 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 SLC3A1Q07837 685 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 PMS2P3Q13401 168 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 OCLNQ16625 522 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 TBC1D28Q2M2D7 210 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 DPY19L1Q2PZI1 675 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 SPATA46Q5T0L3 261 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 C16orf87Q6PH81 154 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 ZNF627Q7L945 461 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 PIWIL3Q7Z3Z3 882 aaKnown RBP10.31□□□□□ -0.76
PRPF8-208ENST00000573716 SLC22A24Q8N4F4 322 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 OR52E2Q8NGJ4 325 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 OR1J1Q8NGS3 322 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 OR52E6Q96RD3 313 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 EGLN1Q9GZT9 426 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 LRMDAQ9H2I8 198 aa10.31□□□□□ -0.76
PRPF8-208ENST00000573716 BEX1Q9HBH7 125 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms