RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 LINC00173Q6ZV60 143 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 TMEM183AQ8IXX5 376 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 DUSP18Q8NEJ0 188 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 OR9K2Q8NGE7 335 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 DNAJC19Q96DA6 116 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 CTPS2Q9NRF8 586 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 PCYOX1Q9UHG3 505 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 ZNF223Q9UK11 482 aaPredicted RBP3.47□□□□□ -1.85
LINC00557-201ENST00000563184 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
LINC00557-201ENST00000563184 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
LINC00557-201ENST00000563184 ANKRD63C9JTQ0 380 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 PALMO75781 387 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 CST1P01037 141 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 RORAP35398 523 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 TFPI2P48307 235 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 NCBP2P52298 156 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF136P52737 540 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 KCNJ2P63252 427 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 VAX1Q5SQQ9 334 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 TSPO2Q5TGU0 170 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 CDR2LQ86X02 465 aaPredicted RBP3.46□□□□□ -1.86
LINC00557-201ENST00000563184 NECAB1Q8N987 351 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 PLPPR1Q8TBJ4 325 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 SLC22A8Q8TCC7 542 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 SDR42E1Q8WUS8 393 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 TMEM54Q969K7 222 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 KCTD14Q9BQ13 255 aaPredicted RBP3.46□□□□□ -1.86
LINC00557-201ENST00000563184 ECSITQ9BQ95 431 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 GABARAPL3Q9BY60 117 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 MYOZ2Q9NPC6 264 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 KLHL28Q9NXS3 571 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 CTNNA3Q9UI47 895 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 RAB26Q9ULW5 256 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 CEMIPQ8WUJ3 1361 aa3.46□□□□□ -1.86
LINC00557-201ENST00000563184 SNAI2O43623 268 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 ERLIN2O94905 339 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 NDUFB10O96000 172 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 UQCRFS1P1P0C7P4 283 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 PBLDP30039 288 aaPredicted RBP3.45□□□□□ -1.86
LINC00557-201ENST00000563184 CCR8P51685 355 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 RPS21P63220 83 aaKnown RBP3.45□□□□□ -1.86
LINC00557-201ENST00000563184 PAX5Q02548 391 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF92Q03936 586 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 ARHGAP19Q14CB8 494 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 COA6Q5JTJ3 125 aaKnown RBP3.45□□□□□ -1.86
LINC00557-201ENST00000563184 SLC22A9Q8IVM8 553 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 ACTRT1Q8TDG2 376 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 TAAR1Q96RJ0 339 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 PLA2G2FQ9BZM2 168 aa3.45□□□□□ -1.86
LINC00557-201ENST00000563184 IGLV3-16A0A075B6K0 115 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 IGKV6D-21A0A0A0MT36 114 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 XKRY2A2RUG3 117 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 H0Y8G0 127 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 H3BNH8 94 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 SNX4O95219 450 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 BGLAPP02818 100 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 SERPIND1P05546 499 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 MCF2P10911 925 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 FOLR1P15328 257 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF43P17038 809 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF32P17041 273 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 RFX3P48380 749 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 SULT1E1P49888 294 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 RORCP51449 518 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 GPX6P59796 221 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 ZBED5Q49AG3 693 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 Q6ZSR3 168 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 C12orf56Q8IXR9 622 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 MS4A15Q8N5U1 240 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 AKR7LQ8NHP1 331 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 CD300LFQ8TDQ1 290 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 CEP170P1Q96L14 293 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 GPR61Q9BZJ8 451 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 CWH43Q9H720 699 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 INPP5EQ9NRR6 644 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 WDR62O43379 1518 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 NFASCO94856 1347 aa3.44□□□□□ -1.86
LINC00557-201ENST00000563184 PRSS37A4D1T9 235 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 XKRYO14609 159 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 SOX15O60248 233 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 ICOSLGO75144 302 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 EIF3GO75821 320 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC00557-201ENST00000563184 CRYGBP07316 175 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 PLEKP08567 350 aaPredicted RBP3.43□□□□□ -1.86
LINC00557-201ENST00000563184 SMIM10L1P0DMW3 83 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 SUCLG1P53597 346 aaKnown RBP3.43□□□□□ -1.86
LINC00557-201ENST00000563184 UGT2B15P54855 530 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 HMGCS1Q01581 520 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 LRRC63Q05C16 580 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 ENPEPQ07075 957 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 SMARCB1Q12824 385 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 GGTLC2Q14390 218 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 TTLL9Q3SXZ7 439 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 RNASEKQ6P5S7 137 aaKnown RBP3.43□□□□□ -1.86
LINC00557-201ENST00000563184 ZFP2Q6ZN57 461 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms